Department of Infection Control, Shandong Provincial Hospital Affiliated to Shandong First Medical University, Jinan 250021, PR China.
National Key Laboratory of Intelligent Tracking and Forecasting for Infectious Diseases, National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Changping, Beijing 102206, PR China.
Int J Syst Evol Microbiol. 2023 Nov;73(11). doi: 10.1099/ijsem.0.006168.
Four yellow-coloured strains (zg-Y815/zg-Y108 and zg-Y859/zg-Y826) were isolated from the intestinal contents of and assigned to the ' group'. The four strains grew optimally on brain heart infusion agar with 5 % defibrinated sheep blood plate at 30 °C, pH 7.0 and with 0.5 % NaCl (w/v). Comparative analysis of their 16S rRNA genes indicated that the two strain pairs belong to the genus , showing the highest similarity to 785 (99.52 %), which was further confirmed by the 16S rRNA gene and genome-based phylogenetic analysis. The comparative genomic analysis [digital DNA-DNA hybridization, (dDDH) and average nucleotide identity (ANI)] proved that the four strains are two different species (zg-Y815/zg-Y108, 71.7 %/96.8 %; zg-Y859/zg-Y826, 87.3 %/98.5 %) and differ from other known species within the genus (zg-Y815, 19.6-32.3 %/77.2-88.0 %; zg-Y859, 19.5-29.3 %/77.4-86.3 %). Strain pairs zg-Y815/zg-Y108 and zg-Y859/zg-Y826 had the same major cellular fatty acids (iso-C and anteiso-C), with MK-8(H) as their dominant respiratory quinone (70.6 and 61.7 %, respectively). The leading polar lipids were diphosphatidylglycerol, phosphatidylglycerol, and phosphatidylinositol. The detected amino acids and cell-wall sugars of the two new species were identical (amino acids: alanine, glutamic acid, and lysine; sugars: rhamnose, galactose, mannose, glucose, and ribose). According to the phylogenetic, phenotypic, and chemotaxonomic analyses, we concluded that the four new strains represented two different novel species in the genus , for which the names sp. nov. (zg-Y815= GDMCC 1.3494 = JCM 35821) and sp. nov. (zg-Y859 = GDMCC 1.3493 = JCM 35822) are proposed.
四株黄色的菌株(zg-Y815/zg-Y108 和 zg-Y859/zg-Y826)从 的肠道内容物中分离出来,并被归为“”群。这四株菌在含有 5%去纤维绵羊血的脑心浸液琼脂平板上于 30°C、pH 值 7.0 和 0.5%NaCl(w/v)的条件下生长最佳。对其 16S rRNA 基因的比较分析表明,这两个菌株对属于 的属,与 785(99.52%)的相似度最高,这进一步通过 16S rRNA 基因和基于基因组的系统发育分析得到了证实。比较基因组分析[数字 DNA-DNA 杂交(dDDH)和平均核苷酸同一性(ANI)]证明,这四株菌是两个不同的种(zg-Y815/zg-Y108,71.7%/96.8%;zg-Y859/zg-Y826,87.3%/98.5%),与属内其他已知种不同(zg-Y815,19.6-32.3%/77.2-88.0%;zg-Y859,19.5-29.3%/77.4-86.3%)。菌株对 zg-Y815/zg-Y108 和 zg-Y859/zg-Y826 的主要细胞脂肪酸(iso-C 和 anteiso-C)相同,其主要呼吸醌为 MK-8(H)(分别为 70.6%和 61.7%)。主要极性脂为双磷脂酰甘油、磷脂酰甘油和磷脂酰肌醇。这两个新种的检测氨基酸和细胞壁糖相同(氨基酸:丙氨酸、谷氨酸和赖氨酸;糖:鼠李糖、半乳糖、甘露糖、葡萄糖和核糖)。根据系统发育、表型和化学分类学分析,我们得出结论,这四个新菌株代表了 的两个不同新种,建议将其命名为 sp. nov.(zg-Y815=GDMCC 1.3494=JCM 35821)和 sp. nov.(zg-Y859=GDMCC 1.3493=JCM 35822)。