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年龄相关性白内障晶状体组织中由mA-lncRNA介导的晶状体上皮细胞铁死亡及GPX4表达

Lens epithelium cell ferroptosis mediated by mA-lncRNA and GPX4 expression in lens tissue of age-related cataract.

作者信息

Wang Yong, Li Pengfei, Wang Congyu, Bao Sijie, Wang Siwen, Zhang Guowei, Zou Xi, Wu Jian, Guan Yu, Ji Min, Guan Huaijin

机构信息

Eye Institute, Affiliated Hospital of Nantong University, 20 Xisi Road, Nantong, Jiangsu, China.

Nantong University, Nantong, Jiangsu, China.

出版信息

BMC Ophthalmol. 2023 Dec 18;23(1):514. doi: 10.1186/s12886-023-03205-8.

Abstract

BACKGROUND

In the present study, we explored the role of N-methyladenosine (mA) modification of long non-coding RNAs (lncRNAs) and its association with ferroptosis in lens epithelium cells (LECs) of age-related cataract (ARC).

METHODS

Through mA RNA immunoprecipitation sequencing (mA-RIP-seq) and RNA sequencing (RNA-seq), we identified mA mediated and differentially expressed lncRNAs (dme-lncRNAs) in ARC patients. Based on bioinformatics analysis, we selected critical dme-lncRNAs and pathways associated with ARC formation to reveal their potential molecular mechanisms. The downregulation of glutathione peroxidase 4 (GPX4), a key component of ferroptosis, was confirmed by real-time RT-PCR (RT-qPCR) and Western blotting in age-related cortical cataract (ARCC) samples. Transmission electron microscopy was used to assess the change in mitochondrial in LECs.

RESULTS

The analysis revealed a total of 11,193 mA peaks within lncRNAs, among which 7043 were enriched and 4150 were depleted. Among those, lncRNA ENST00000586817(upstream of the GPX4 gene) was not only significantly upregulated in the LECs of ARCC but also potentially augmented the expression of GPX4 through a cis mechanism. The expression of mA-modified lncRNA (ENST00000586817) was correlated with that of GPX4 and was downregulated in ARC patients. The TEM results indicated significant mitochondrial changes in ARCC samples. GPX4 downregulation enhanced LEC ferroptosis and decreased viability via RSL3 in SRA01/04 cells.

CONCLUSIONS

Our results provide insight into the potential function of mA-modified lncRNAs. MA-modified lncRNA ENST00000586817 might regulate the expression of GPX4 by a cis mechanism and be implicated in ferroptosis in ARCs.

摘要

背景

在本研究中,我们探讨了长链非编码RNA(lncRNA)的N - 甲基腺苷(mA)修饰的作用及其与年龄相关性白内障(ARC)晶状体上皮细胞(LEC)中铁死亡的关联。

方法

通过mA RNA免疫沉淀测序(mA - RIP - seq)和RNA测序(RNA - seq),我们鉴定了ARC患者中由mA介导的差异表达lncRNA(dme - lncRNA)。基于生物信息学分析,我们选择了与ARC形成相关的关键dme - lncRNA和途径,以揭示其潜在的分子机制。通过实时逆转录PCR(RT - qPCR)和蛋白质印迹法在年龄相关性皮质性白内障(ARCC)样本中证实了铁死亡关键成分谷胱甘肽过氧化物酶4(GPX4)的下调。透射电子显微镜用于评估LEC中线粒体的变化。

结果

分析显示lncRNA中共存在11,193个mA峰,其中7043个峰富集,4150个峰缺失。其中,lncRNA ENST00000586817(GPX4基因上游)不仅在ARCC的LEC中显著上调,而且可能通过顺式机制增强GPX4的表达。mA修饰的lncRNA(ENST00000586817)的表达与GPX4的表达相关,并且在ARC患者中下调。透射电镜结果表明ARCC样本中线粒体有显著变化。GPX4下调通过RSL3增强了SRA01/04细胞中的LEC铁死亡并降低了细胞活力。

结论

我们的结果为mA修饰的lncRNA的潜在功能提供了见解。mA修饰的lncRNA ENST00000586817可能通过顺式机制调节GPX4的表达,并与ARC中的铁死亡有关。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/527e/10726616/efd178bfd3fe/12886_2023_3205_Fig1_HTML.jpg

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