Department of Biomedical Engineering, Texas A&M University, College Station, United States.
Department of Dermatology, Harvard Medical School, Boston, United States.
Elife. 2024 Jan 3;13:e91881. doi: 10.7554/eLife.91881.
Mechanical force is critical for the interaction between an αβ T cell receptor (TCR) and a peptide-bound major histocompatibility complex (pMHC) molecule to initiate productive T-cell activation. However, the underlying mechanism remains unclear. We use all-atom molecular dynamics simulations to examine the A6 TCR bound to HLA-A*02:01 presenting agonist or antagonist peptides under different extensions to simulate the effects of applied load on the complex, elucidating their divergent biological responses. We found that TCR α and β chains move asymmetrically, which impacts the interface with pMHC, in particular the peptide-sensing CDR3 loops. For the wild-type agonist, the complex stabilizes in a load-dependent manner while antagonists destabilize it. Simulations of the Cβ FG-loop deletion, which reduces the catch bond response, and simulations with in silico mutant peptides further support the observed behaviors. The present results highlight the combined role of interdomain motion, fluctuating forces, and interfacial contacts in determining the mechanical response and fine peptide discrimination by a TCR, thereby resolving the conundrum of nearly identical crystal structures of TCRαβ-pMHC agonist and antagonist complexes.
机械力对于 αβ T 细胞受体 (TCR) 与结合肽的主要组织相容性复合体 (pMHC) 分子之间的相互作用至关重要,可启动有效的 T 细胞激活。然而,其潜在机制仍不清楚。我们使用全原子分子动力学模拟来检查 A6 TCR 与 HLA-A*02:01 呈递激动剂或拮抗剂肽在不同延伸下的结合情况,以模拟施加的负载对复合物的影响,阐明它们不同的生物学反应。我们发现 TCR α 和 β 链不对称移动,这会影响与 pMHC 的界面,特别是肽感应 CDR3 环。对于野生型激动剂,复合物以依赖于负载的方式稳定,而拮抗剂则使其不稳定。Cβ FG 环缺失的模拟,这会降低捕获键的响应,以及具有计算机突变肽的模拟进一步支持了观察到的行为。目前的结果强调了结构域间运动、波动力和界面接触在确定 TCR 机械响应和精细肽识别中的综合作用,从而解决了 TCRαβ-pMHC 激动剂和拮抗剂复合物几乎相同的晶体结构的难题。