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使用基于聚合物的沉淀法从革兰氏阳性菌膜泡中提取 RNA。

RNA Extraction from Gram-Positive Bacteria Membrane Vesicles Using a Polymer-Based Precipitation Method.

机构信息

Department of Biological Sciences, Ohio University, Athens, OH, USA.

Molecular and Cellular Biology Program, Ohio University, Athens, OH, USA.

出版信息

Methods Mol Biol. 2024;2741:3-10. doi: 10.1007/978-1-0716-3565-0_1.

DOI:10.1007/978-1-0716-3565-0_1
PMID:38217645
Abstract

Investigations into the biological role and composition of bacterial extracellular vesicles have grown in popularity in recent years. Vesicles perform a variety of functions during interactions with eukaryotic host cells, ranging from antibiotic resistance to immune modulation. It is necessary to isolate vesicles in order to understand their biological functions. Here we describe a polymer-based precipitation method allowing high-yield isolation of extracellular vesicles and their cargo RNA from the Gram-positive bacterium Staphylococcus aureus.

摘要

近年来,对细菌细胞外囊泡的生物学作用和组成的研究越来越受到关注。囊泡在与真核宿主细胞相互作用过程中发挥多种功能,从抗生素耐药性到免疫调节。为了了解它们的生物学功能,有必要对囊泡进行分离。在这里,我们描述了一种基于聚合物的沉淀方法,可从革兰氏阳性菌金黄色葡萄球菌中高效分离细胞外囊泡及其货物 RNA。

相似文献

1
RNA Extraction from Gram-Positive Bacteria Membrane Vesicles Using a Polymer-Based Precipitation Method.使用基于聚合物的沉淀法从革兰氏阳性菌膜泡中提取 RNA。
Methods Mol Biol. 2024;2741:3-10. doi: 10.1007/978-1-0716-3565-0_1.
2
Extracellular Vesicle Biogenesis and Functions in Gram-Positive Bacteria.革兰氏阳性菌中细胞外囊泡的生物发生和功能。
Infect Immun. 2020 Nov 16;88(12). doi: 10.1128/IAI.00433-20.
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Peptidylarginine Deiminase Inhibitors Reduce Bacterial Membrane Vesicle Release and Sensitize Bacteria to Antibiotic Treatment.肽基精氨酸脱亚氨酶抑制剂可减少细菌膜泡释放并增强细菌对抗生素治疗的敏感性。
Front Cell Infect Microbiol. 2019 Jun 27;9:227. doi: 10.3389/fcimb.2019.00227. eCollection 2019.
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An update on our understanding of Gram-positive bacterial membrane vesicles: discovery, functions, and applications.革兰氏阳性菌膜泡的研究进展:发现、功能与应用
Front Cell Infect Microbiol. 2023 Oct 4;13:1273813. doi: 10.3389/fcimb.2023.1273813. eCollection 2023.
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Characterization and function of membrane vesicles in Gram-positive bacteria.革兰氏阳性菌中膜泡的特性与功能。
Appl Microbiol Biotechnol. 2021 Mar;105(5):1795-1801. doi: 10.1007/s00253-021-11140-1. Epub 2021 Feb 6.
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The Mechanism behind Bacterial Lipoprotein Release: Phenol-Soluble Modulins Mediate Toll-Like Receptor 2 Activation via Extracellular Vesicle Release from Staphylococcus aureus.细菌脂蛋白释放的机制:金黄色葡萄球菌通过细胞外囊泡释放酚可溶性调节蛋白介导 Toll 样受体 2 的激活。
mBio. 2018 Nov 20;9(6):e01851-18. doi: 10.1128/mBio.01851-18.
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Staphylococcus aureus Releases Proinflammatory Membrane Vesicles To Resist Antimicrobial Fatty Acids.金黄色葡萄球菌释放促炎膜泡以抵抗抗菌脂肪酸。
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Extraction and Analysis of RNA Isolated from Pure Bacteria-Derived Outer Membrane Vesicles.从纯细菌来源的外膜囊泡中分离的RNA的提取与分析
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本文引用的文献

1
membrane vesicles contain immunostimulatory DNA, RNA and peptidoglycan that activate innate immune receptors and induce autophagy.膜泡含有免疫刺激性的 DNA、RNA 和肽聚糖,这些物质可以激活先天免疫受体并诱导自噬。
J Extracell Vesicles. 2021 Apr;10(6):e12080. doi: 10.1002/jev2.12080. Epub 2021 Apr 1.
2
Membrane Vesicles as a Vehicle of Bacteriocin Delivery.膜泡作为细菌素递送载体
Front Microbiol. 2020 Apr 30;11:710. doi: 10.3389/fmicb.2020.00710. eCollection 2020.
3
A comparison of methods for the isolation and separation of extracellular vesicles from protein and lipid particles in human serum.
比较从人血清中蛋白质和脂质颗粒中分离和分离细胞外囊泡的方法。
Sci Rep. 2020 Jan 23;10(1):1039. doi: 10.1038/s41598-020-57497-7.
4
The Mechanism behind Bacterial Lipoprotein Release: Phenol-Soluble Modulins Mediate Toll-Like Receptor 2 Activation via Extracellular Vesicle Release from Staphylococcus aureus.细菌脂蛋白释放的机制:金黄色葡萄球菌通过细胞外囊泡释放酚可溶性调节蛋白介导 Toll 样受体 2 的激活。
mBio. 2018 Nov 20;9(6):e01851-18. doi: 10.1128/mBio.01851-18.
5
Propionibacterium acnes-Derived Extracellular Vesicles Promote Acne-Like Phenotypes in Human Epidermis.痤疮丙酸杆菌来源的细胞外囊泡促进人表皮的痤疮样表型。
J Invest Dermatol. 2018 Jun;138(6):1371-1379. doi: 10.1016/j.jid.2018.01.007. Epub 2018 Jan 31.
6
Bacterial outer membrane vesicle biogenesis: a new mechanism and its implications.细菌外膜囊泡生物发生:一种新机制及其影响。
Microb Cell. 2016 May 10;3(6):257-259. doi: 10.15698/mic2016.06.508.
7
A Novel Mechanism of Host-Pathogen Interaction through sRNA in Bacterial Outer Membrane Vesicles.细菌外膜囊泡中通过小RNA进行宿主-病原体相互作用的新机制
PLoS Pathog. 2016 Jun 13;12(6):e1005672. doi: 10.1371/journal.ppat.1005672. eCollection 2016 Jun.
8
Through the wall: extracellular vesicles in Gram-positive bacteria, mycobacteria and fungi.穿越细胞壁:革兰氏阳性菌、分枝杆菌和真菌中的细胞外囊泡
Nat Rev Microbiol. 2015 Oct;13(10):620-30. doi: 10.1038/nrmicro3480. Epub 2015 Sep 1.
9
Immune modulation by bacterial outer membrane vesicles.细菌外膜囊泡的免疫调节作用。
Nat Rev Immunol. 2015 Jun;15(6):375-87. doi: 10.1038/nri3837. Epub 2015 May 15.
10
An important role of α-hemolysin in extracellular vesicles on the development of atopic dermatitis induced by Staphylococcus aureus.α-溶血素在细胞外囊泡中对金黄色葡萄球菌诱导的特应性皮炎发展的重要作用。
PLoS One. 2014 Jul 3;9(7):e100499. doi: 10.1371/journal.pone.0100499. eCollection 2014.