利用尸检脑组织检测多系统萎缩中的铁死亡和免疫浸润特征。
Detecting ferroptosis and immune infiltration profiles in multiple system atrophy using postmortem brain tissue.
作者信息
Chen Linxi, Mao Lingqun, Lu Hongsheng, Liu Peng
机构信息
Department of Neurology, Taizhou Central Hospital (Taizhou University Hospital), Taizhou, Zhejiang, China.
Department of Pathology, Taizhou Central Hospital (Taizhou University Hospital), Taizhou, Zhejiang, China.
出版信息
Front Neurosci. 2023 Dec 29;17:1269996. doi: 10.3389/fnins.2023.1269996. eCollection 2023.
BACKGROUND
The importance of ferroptosis and the immune system has been mentioned in the pathogenesis of α-synucleinopathy. The α-synuclein-immunoreactive inclusions that primarily affect oligodendrocytes are the hallmark of multiple system atrophy (MSA). Limited evidence implicates that iron and immune responses are involved in the pathogenesis of MSA, which is associated with neurodegeneration and α-synuclein aggregation.
METHODS
The RNA sequencing data were collected from the Gene Expression Omnibus database. MSA-C-related module genes were identified through weighted gene co-expression network analysis. Gene Ontology and Kyoto Encyclopedia of Genes and Genomes analyses were performed to predict the potential molecular functions. The candidate ferroptosis-related genes associated with MSA-C were obtained using a machine-learning algorithm. CIBERSORT was used to estimate the compositional patterns of the 22 types of immune cells.
RESULTS
The tissues for sequencing were extracted from postmortem cerebellar white matter tissues of 11 MSA-C patients and 47 healthy controls. The diagnostic ability of the six MSA-C-related ferroptosis-related genes in discriminating MSA-C from the healthy controls demonstrated a favorable diagnostic value, with the AUC ranging from 0.662 to 0.791. The proportion of CD8 T cells in MSA-C was significantly higher than in the controls ( = 0.02). The proportion of NK cells resting in MSA-C was significantly higher than in the controls ( = 0.011).
CONCLUSION
Ferroptosis and T-cell infiltration may be important pathways of disease development in MSA-C, and targeting therapies for these pathways may be disease-modifying.
背景
铁死亡和免疫系统在α-突触核蛋白病的发病机制中的重要性已被提及。主要影响少突胶质细胞的α-突触核蛋白免疫反应性包涵体是多系统萎缩(MSA)的标志。有限的证据表明铁和免疫反应参与了MSA的发病机制,这与神经退行性变和α-突触核蛋白聚集有关。
方法
从基因表达综合数据库收集RNA测序数据。通过加权基因共表达网络分析确定与MSA-C相关的模块基因。进行基因本体论和京都基因与基因组百科全书分析以预测潜在的分子功能。使用机器学习算法获得与MSA-C相关的候选铁死亡相关基因。使用CIBERSORT估计22种免疫细胞的组成模式。
结果
测序组织取自11例MSA-C患者和47例健康对照的死后小脑白质组织。六个与MSA-C相关的铁死亡相关基因在区分MSA-C与健康对照方面的诊断能力显示出良好的诊断价值,曲线下面积(AUC)范围为0.662至0.791。MSA-C中CD8 T细胞的比例显著高于对照组(P = 0.02)。MSA-C中静息NK细胞的比例显著高于对照组(P = 0.011)。
结论
铁死亡和T细胞浸润可能是MSA-C疾病发展的重要途径,针对这些途径的靶向治疗可能具有疾病修饰作用。