Environmental Biotechnology and Genomics Division, CSIR-National Environmental Engineering Research Institute Nehru Marg, Nagpur, 440020, India.
Academy of Scientific and Innovative Research (AcSIR), Ghaziabad, 201002, India.
Arch Microbiol. 2024 Jan 31;206(2):84. doi: 10.1007/s00203-023-03816-1.
Enterococcus mundtii AM_AQ_BC8 isolated from biofouled filtration membrane was characterised as a potential probiotic bacterium showing strong L-lactic acid-producing capability. Experimental studies revealed that E. mundtii AM_AQ_BC8 possess antibiofilm and antimicrobial ability too, as tested against strong biofilm-forming bacteria like Pseudomonas spp. The present study has evaluated the genetic potential of E. mundtii AM_AQ_BC8 through genome sequencing. Whole genome analysis revealed the presence of key genes like ldh_1 and ldh_2 responsible for lactic acid production along with genes encoding probiotic features such as acid and bile salt resistance (dnaK, dnaJ, argS), fatty acid synthesis (fabD, fabE) and lactose utilisation (lacG, lacD). The phylogenomic analysis based on OrthoANI (99.85%) and dDDH (96.8%) values revealed that the strain AM_AQ_BC8 shared the highest homology with E. mundtii. The genome sequence of strain AM_AQ_BC8 has been deposited to NCBI and released with GenBank accession no. SAMN32531201. The study primarily demonstrated the probiotic potential of E. mundtii AM_AQ_BC8 isolate, for L-lactate synthesis in high concentration (8.98 g/L/day), which also showed anti-biofilm and antimicrobial activities.
从生物污染过滤膜中分离出的屎肠球菌 AM_AQ_BC8 被鉴定为一种具有强产 L-乳酸能力的潜在益生菌细菌。实验研究表明,屎肠球菌 AM_AQ_BC8 也具有抗生物膜和抗菌能力,可对抗强生物膜形成细菌如假单胞菌属。本研究通过基因组测序评估了屎肠球菌 AM_AQ_BC8 的遗传潜力。全基因组分析显示存在关键基因,如负责乳酸生产的 ldh_1 和 ldh_2 基因,以及编码益生菌特性的基因,如酸和胆汁盐抗性 (dnaK、dnaJ、argS)、脂肪酸合成 (fabD、fabE) 和乳糖利用 (lacG、lacD)。基于 OrthoANI(99.85%)和 dDDH(96.8%)值的系统发育基因组分析表明,菌株 AM_AQ_BC8 与屎肠球菌具有最高的同源性。菌株 AM_AQ_BC8 的基因组序列已被提交到 NCBI,并以 GenBank accession no. SAMN32531201 发布。该研究主要证明了屎肠球菌 AM_AQ_BC8 分离株的益生菌潜力,可用于高浓度(8.98 g/L/天)的 L-乳酸合成,同时还表现出抗生物膜和抗菌活性。