AI in infectious diseases: The role of datasets.
作者信息
de la Fuente-Nunez Cesar
机构信息
Machine Biology Group, Departments of Psychiatry and Microbiology, Institute for Biomedical Informatics, Institute for Translational Medicine and Therapeutics, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, United States of America; Departments of Bioengineering and Chemical and Biomolecular Engineering, School of Engineering and Applied Science, University of Pennsylvania, Philadelphia, PA, United States of America; Department of Chemistry, School of Arts and Sciences, University of Pennsylvania, Philadelphia, PA, United States of America; Penn Institute for Computational Science, University of Pennsylvania, Philadelphia, PA, United States of America.
出版信息
Drug Resist Updat. 2024 Mar;73:101067. doi: 10.1016/j.drup.2024.101067. Epub 2024 Feb 10.
Abstract
摘要
相似文献
1
AI in infectious diseases: The role of datasets.人工智能在传染病中的应用：数据集的作用。
Drug Resist Updat. 2024 Mar;73:101067. doi: 10.1016/j.drup.2024.101067. Epub 2024 Feb 10.
2
Artificial intelligence and machine learning assisted drug delivery for effective treatment of infectious diseases.人工智能和机器学习辅助药物输送，以有效治疗传染病。
Adv Drug Deliv Rev. 2021 Nov;178:113922. doi: 10.1016/j.addr.2021.113922. Epub 2021 Aug 28.
3
Explainable artificial intelligence and machine learning: novel approaches to face infectious diseases challenges.可解释人工智能和机器学习：应对面部传染病挑战的新方法。
Ann Med. 2023;55(2):2286336. doi: 10.1080/07853890.2023.2286336. Epub 2023 Nov 27.
4
Artificial Intelligence in battling infectious diseases: A transformative role.人工智能在抗击传染病中的作用：变革性的角色。
J Med Virol. 2024 Jan;96(1):e29355. doi: 10.1002/jmv.29355.
5
Artificial intelligence with mass spectrometry-based multimodal molecular profiling methods for advancing therapeutic discovery of infectious diseases.基于质谱的多模态分子分析方法的人工智能在推进传染病治疗发现中的应用。
Pharmacol Ther. 2024 Nov;263:108712. doi: 10.1016/j.pharmthera.2024.108712. Epub 2024 Sep 4.
6
Infectious disease hospitalizations among American Indian and Alaska native infants.美国印第安人和阿拉斯加原住民婴儿的传染病住院情况。
Pediatrics. 2003 Feb;111(2):E176-82. doi: 10.1542/peds.111.2.e176.
7
Machine learning in infectious diseases: potential applications and limitations.机器学习在传染病学中的应用：潜在的应用和局限性。
Ann Med. 2024 Dec;56(1):2362869. doi: 10.1080/07853890.2024.2362869. Epub 2024 Jun 10.
8
Language discrepancies in the performance of generative artificial intelligence models: an examination of infectious disease queries in English and Arabic.生成式人工智能模型在性能方面的语言差异：对英文和阿拉伯文传染病查询的考察。
BMC Infect Dis. 2024 Aug 8;24(1):799. doi: 10.1186/s12879-024-09725-y.
9
Leveraging artificial intelligence in the fight against infectious diseases.利用人工智能对抗传染病。
Science. 2023 Jul 14;381(6654):164-170. doi: 10.1126/science.adh1114. Epub 2023 Jul 13.
10
Targeting Infectious Coronavirus Disease 2019 (COVID-19) with Artificial Intelligence (AI) Applications: Evidence Based Opinion.利用人工智能（AI）应用针对2019年传染性冠状病毒病（COVID-19）：基于证据的观点。
Infect Disord Drug Targets. 2021;21(4):475-477. doi: 10.2174/1871526520666200622144857.
引用本文的文献
1
Mitigating antimicrobial resistance by innovative solutions in AI (MARISA): a modified James Lind Alliance analysis.通过人工智能创新解决方案减轻抗菌药物耐药性（MARISA）：一项改良的詹姆斯·林德联盟分析
NPJ Antimicrob Resist. 2025 Sep 1;3(1):75. doi: 10.1038/s44259-025-00150-y.
2
AI-Driven Antimicrobial Peptide Discovery: Mining and Generation.人工智能驱动的抗菌肽发现：挖掘与生成
Acc Chem Res. 2025 Jun 17;58(12):1831-1846. doi: 10.1021/acs.accounts.0c00594. Epub 2025 Jun 3.
3
Tutorial: guidelines for the use of machine learning methods to mine genomes and proteomes for antibiotic discovery.教程：使用机器学习方法挖掘基因组和蛋白质组以发现抗生素的指南。
Nat Protoc. 2025 May 14. doi: 10.1038/s41596-025-01144-w.
4
Paving the way for new antimicrobial peptides through molecular de-extinction.通过分子复活为新型抗菌肽铺平道路。
Microb Cell. 2025 Feb 20;12:1-8. doi: 10.15698/mic2025.02.841. eCollection 2025.
5
Challenges and applications of artificial intelligence in infectious diseases and antimicrobial resistance.人工智能在传染病和抗菌药物耐药性方面的挑战与应用
NPJ Antimicrob Resist. 2025 Jan 7;3(1):2. doi: 10.1038/s44259-024-00068-x.
6
AI Methods for Antimicrobial Peptides: Progress and Challenges.抗菌肽的人工智能方法：进展与挑战
Microb Biotechnol. 2025 Jan;18(1):e70072. doi: 10.1111/1751-7915.70072.
7
Mining biology for antibiotic discovery.挖掘生物学以发现抗生素。
PLoS Biol. 2024 Nov 26;22(11):e3002946. doi: 10.1371/journal.pbio.3002946. eCollection 2024 Nov.
本文引用的文献
1
Cell-free biosynthesis combined with deep learning accelerates de novo-development of antimicrobial peptides.无细胞生物合成与深度学习相结合加速了抗菌肽的从头开发。
Nat Commun. 2023 Nov 8;14(1):7197. doi: 10.1038/s41467-023-42434-9.
2
Antibiotic failure: Beyond antimicrobial resistance.抗生素治疗失败：超越抗菌药物耐药性
Drug Resist Updat. 2023 Nov;71:101012. doi: 10.1016/j.drup.2023.101012. Epub 2023 Oct 18.
3
Molecular de-extinction of ancient antimicrobial peptides enabled by machine learning.机器学习助力古老抗菌肽的分子复活。
Cell Host Microbe. 2023 Aug 9;31(8):1260-1274.e6. doi: 10.1016/j.chom.2023.07.001. Epub 2023 Jul 28.
4
Leveraging artificial intelligence in the fight against infectious diseases.利用人工智能对抗传染病。
Science. 2023 Jul 14;381(6654):164-170. doi: 10.1126/science.adh1114. Epub 2023 Jul 13.
5
Deep learning-guided discovery of an antibiotic targeting Acinetobacter baumannii.深度学习指导下针对鲍曼不动杆菌的抗生素的发现。
Nat Chem Biol. 2023 Nov;19(11):1342-1350. doi: 10.1038/s41589-023-01349-8. Epub 2023 May 25.
6
Discovering highly potent antimicrobial peptides with deep generative model HydrAMP.利用深度生成模型HydrAMP发现高效抗菌肽。
Nat Commun. 2023 Mar 15;14(1):1453. doi: 10.1038/s41467-023-36994-z.
7
Artificial intelligence-based tools applied to pathological diagnosis of microbiological diseases.基于人工智能的工具在微生物疾病病理学诊断中的应用。
Pathol Res Pract. 2023 Mar;243:154362. doi: 10.1016/j.prp.2023.154362. Epub 2023 Feb 6.
8
Deep generative models for peptide design.用于肽设计的深度生成模型。
Digit Discov. 2022 Mar 31;1(3):195-208. doi: 10.1039/d1dd00024a. eCollection 2022 Jun 13.
9
Identification of antimicrobial peptides from the human gut microbiome using deep learning.利用深度学习从人类肠道微生物组中识别抗菌肽。
Nat Biotechnol. 2022 Jun;40(6):921-931. doi: 10.1038/s41587-022-01226-0. Epub 2022 Mar 3.
10
Mining for encrypted peptide antibiotics in the human proteome.在人类蛋白质组中挖掘加密的肽抗生素。
Nat Biomed Eng. 2022 Jan;6(1):67-75. doi: 10.1038/s41551-021-00801-1. Epub 2021 Nov 4.
Zotero 插件