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鉴定与阿拉伯按蚊对滴滴涕抗性相关的ε-谷胱甘肽S-转移酶基因的假定启动子元件。

Identification of putative promoter elements for epsilon glutathione s-transferases genes associated with resistance to DDT in the malaria vector mosquito anopheles arabiensis.

作者信息

Manu Yayo Abdulsalm, Abduljalal Ado, Rabiu Muhammad Balarabe, Lawal Rogo Dahiru, Saleh Jalaluddeen, Safiyanu Mahmud

机构信息

Department of Microbiology and Parasitology, Bayero University, Kano.

Centre for Infectious Disease Research, Bayero University, Kano.

出版信息

Sci Afr. 2024 Mar;23:None. doi: 10.1016/j.sciaf.2023.e02047.

DOI:10.1016/j.sciaf.2023.e02047
PMID:38445294
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10911095/
Abstract

The purpose of this study was to identify the putative regulatory elements in the promoter region of strains which differed in susceptibility to DDT and compare with those identified in its sibling . Basal expression level of Epsilon class GSTs (Glutathione S - transferases) GSTe1 gene was 0.512 - 0.658 (95% CI) and GSTe2 0.672 - 1.204 (95% CI) in adults of DDT resistant KGB compared to 0.031 - 0.04 (95% CI) and 0.148 - 0.199 (95% CI) respectively in susceptible MAT strains of . Induced mean expression of GSTe2 in larvae exposed to DDT for one hour was 0.901 - 1.172 (95% CI) in KGB and 0.475 - 0.724 (95% CI) in MAT strain. In present work, strain specific primers were used to amplify and sequenced the promoter regions of GSTe1 and GSTe2 in the KGB, MAT and field specimens. Computational analysis revealed presence of classical arthropod initiator sequence TCAGT and putative core promoter elements, GC, CAAT, TATA boxes. A typical TATA box was identified at 35 bp upstream Transcription Start Site (TSS) in GSTe1 but was absent in GSTe2. Several binding sites for regulatory elements downstream and multiple polymorphic sites were identified between strains. The role of these regulatory elements in transcription of these genes has not been determined. However, on comparison the 2 bp adenosine indel (insertion/deletion) which was essential in driving the promoter activity in was identified only DDT resistant KGB strain.

摘要

本研究的目的是鉴定对滴滴涕敏感性不同的品系启动子区域中假定的调控元件,并与在其同属品系中鉴定出的调控元件进行比较。与敏感的MAT品系成虫中谷胱甘肽S - 转移酶(GST)Epsilon类GSTe1基因的基础表达水平0.031 - 0.04(95%置信区间)和GSTe2的0.148 - 0.199(95%置信区间)相比,滴滴涕抗性KGB品系成虫中GSTe1基因的基础表达水平为0.512 - 0.658(95%置信区间),GSTe2为0.672 - 1.204(95%置信区间)。在暴露于滴滴涕一小时的幼虫中,KGB品系GSTe2的诱导平均表达水平为0.901 - 1.172(95%置信区间),MAT品系为0.475 - 0.724(95%置信区间)。在本研究中,使用品系特异性引物对KGB、MAT和野外样本中GSTe1和GSTe2的启动子区域进行扩增和测序。计算分析揭示了经典节肢动物起始序列TCAGT以及假定的核心启动子元件GC、CAAT、TATA框的存在。在GSTe1转录起始位点(TSS)上游35 bp处鉴定出一个典型的TATA框,但在GSTe2中不存在。在品系之间鉴定出了几个下游调控元件的结合位点和多个多态性位点。这些调控元件在这些基因转录中的作用尚未确定。然而,通过比较发现,在[未提及的相关研究中]驱动启动子活性所必需的2 bp腺苷插入/缺失仅在滴滴涕抗性KGB品系中被鉴定到。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ef5a/10911095/33896468fb36/gr3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ef5a/10911095/51f7eb47102e/gr1a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ef5a/10911095/7f734f838728/gr2a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ef5a/10911095/33896468fb36/gr3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ef5a/10911095/51f7eb47102e/gr1a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ef5a/10911095/7f734f838728/gr2a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ef5a/10911095/33896468fb36/gr3.jpg

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