Chemical and Biological Engineering Department, Tufts University, Medford, MA, USA.
Biomedical Engineering Department, Tufts University, Medford, MA, USA.
Methods Mol Biol. 2024;2760:219-251. doi: 10.1007/978-1-0716-3658-9_14.
Expanding the genetic code beyond the 20 canonical amino acids enables access to a wide range of chemical functionality that is inaccessible within conventionally biosynthesized proteins. The vast majority of efforts to expand the genetic code have focused on the orthogonal translation systems required to achieve the genetically encoded addition of noncanonical amino acids (ncAAs) into proteins. There remain tremendous opportunities for identifying genetic and genomic factors that enhance ncAA incorporation. Here we describe genome-wide screening strategies to identify factors that enable more efficient addition of ncAAs to biosynthesized proteins. These unbiased screens can reveal previously unknown genes or mutations that can enhance ncAA incorporation and deepen our understanding of the translation apparatus.
将遗传密码扩展到 20 种标准氨基酸之外,可以获得广泛的化学功能,而这些功能在传统生物合成的蛋白质中是无法获得的。绝大多数扩展遗传密码的努力都集中在实现遗传编码的非标准氨基酸(ncAA)添加到蛋白质所需的正交翻译系统上。仍然有很大的机会确定可以增强 ncAA 掺入的遗传和基因组因素。在这里,我们描述了全基因组筛选策略,以确定可以更有效地将 ncAA 添加到生物合成蛋白质中的因素。这些无偏筛选可以揭示以前未知的基因或突变,这些基因或突变可以增强 ncAA 的掺入,并加深我们对翻译装置的理解。