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VitroJet:新功能与案例研究。

VitroJet: new features and case studies.

机构信息

Maastricht Multimodal Molecular Imaging Institute (M4i), Division of Nanoscopy, Maastricht University, Maastricht, The Netherlands.

Ernst Ruska-Centre for Microscopy and Spectroscopy with Electrons (ER-C-3): Structural Biology, Forschungszentrum Jülich, Jülich, Germany.

出版信息

Acta Crystallogr D Struct Biol. 2024 Apr 1;80(Pt 4):232-246. doi: 10.1107/S2059798324001852. Epub 2024 Mar 15.

DOI:10.1107/S2059798324001852
PMID:38488730
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10994172/
Abstract

Single-particle cryo-electron microscopy has become a widely adopted method in structural biology due to many recent technological advances in microscopes, detectors and image processing. Before being able to inspect a biological sample in an electron microscope, it needs to be deposited in a thin layer on a grid and rapidly frozen. The VitroJet was designed with this aim, as well as avoiding the delicate manual handling and transfer steps that occur during the conventional grid-preparation process. Since its creation, numerous technical developments have resulted in a device that is now widely utilized in multiple laboratories worldwide. It features plasma treatment, low-volume sample deposition through pin printing, optical ice-thickness measurement and cryofixation of pre-clipped Autogrids through jet vitrification. This paper presents recent technical improvements to the VitroJet and the benefits that it brings to the cryo-EM workflow. A wide variety of applications are shown: membrane proteins, nucleosomes, fatty-acid synthase, Tobacco mosaic virus, lipid nanoparticles, tick-borne encephalitis viruses and bacteriophages. These case studies illustrate the advancement of the VitroJet into an instrument that enables accurate control and reproducibility, demonstrating its suitability for time-efficient cryo-EM structure determination.

摘要

单颗粒冷冻电子显微镜技术由于在显微镜、探测器和图像处理方面的许多最新技术进步,已经成为结构生物学中广泛应用的方法。在能够在电子显微镜中检查生物样本之前,需要将其沉积在网格上的薄层上并迅速冷冻。VitroJet 的设计目的是避免在传统的网格制备过程中发生的精细手动处理和转移步骤。自创建以来,许多技术发展导致该设备现在在全球多个实验室中得到广泛应用。它具有等离子体处理、通过针印刷进行小体积样品沉积、光学冰厚测量以及通过喷射玻璃化对预先夹取的 Autogrids 进行 cryofixation。本文介绍了 VitroJet 的最新技术改进以及它为 cryo-EM 工作流程带来的好处。展示了各种各样的应用:膜蛋白、核小体、脂肪酸合酶、烟草花叶病毒、脂质纳米颗粒、蜱传脑炎病毒和噬菌体。这些案例研究说明了 VitroJet 已发展成为一种能够实现精确控制和重现性的仪器,证明了其适用于高效 cryo-EM 结构测定。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/27e7/10994172/ebc4edb46b76/d-80-00232-fig4a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/27e7/10994172/47fbbc34bbd4/d-80-00232-fig1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/27e7/10994172/3790f97dc99b/d-80-00232-fig2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/27e7/10994172/e2b5b57ff5a0/d-80-00232-fig3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/27e7/10994172/ebc4edb46b76/d-80-00232-fig4a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/27e7/10994172/47fbbc34bbd4/d-80-00232-fig1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/27e7/10994172/3790f97dc99b/d-80-00232-fig2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/27e7/10994172/e2b5b57ff5a0/d-80-00232-fig3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/27e7/10994172/ebc4edb46b76/d-80-00232-fig4a.jpg

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`Cryo-EM': electron cryomicroscopy, cryo electron microscopy or something else?`Cryo-EM`:电子冷冻显微镜,冷冻电子显微镜还是其他什么?
IUCrJ. 2023 Sep 1;10(Pt 5):519-520. doi: 10.1107/S2052252523006759.
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Measuring cryo-TEM sample thickness using reflected light microscopy and machine learning.使用反射光显微镜和机器学习测量 cryo-TEM 样品厚度。
J Struct Biol. 2023 Jun;215(2):107965. doi: 10.1016/j.jsb.2023.107965. Epub 2023 Apr 24.
4
Applications and prospects of cryo-EM in drug discovery.低温电镜技术在药物研发中的应用与展望。
Mil Med Res. 2023 Mar 6;10(1):10. doi: 10.1186/s40779-023-00446-y.
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Measuring the effects of ice thickness on resolution in single particle cryo-EM.测量冰层厚度对单颗粒冷冻电镜分辨率的影响。
J Struct Biol X. 2023 Jan 24;7:100085. doi: 10.1016/j.yjsbx.2023.100085. eCollection 2023.
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Fully automated multi-grid cryoEM screening using Smart Leginon.使用 Smart Leginon 进行全自动多网格低温电镜筛选。
IUCrJ. 2023 Jan 1;10(Pt 1):77-89. doi: 10.1107/S2052252522010624.
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