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CCR4-NOT 复合物的 CNOT3 亚基驱动的翻译效率促进白血病发生。

Translation efficiency driven by CNOT3 subunit of the CCR4-NOT complex promotes leukemogenesis.

机构信息

Faculty of Pharmaceutical Sciences, University of British Columbia, Vancouver, Canada.

Terry Fox Laboratory, British Columbia Cancer Research Centre Vancouver, Vancouver, Canada.

出版信息

Nat Commun. 2024 Mar 15;15(1):2340. doi: 10.1038/s41467-024-46665-2.


DOI:10.1038/s41467-024-46665-2
PMID:38491013
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10943099/
Abstract

Protein synthesis is frequently deregulated during tumorigenesis. However, the precise contexts of selective translational control and the regulators of such mechanisms in cancer is poorly understood. Here, we uncovered CNOT3, a subunit of the CCR4-NOT complex, as an essential modulator of translation in myeloid leukemia. Elevated CNOT3 expression correlates with unfavorable outcomes in patients with acute myeloid leukemia (AML). CNOT3 depletion induces differentiation and apoptosis and delayed leukemogenesis. Transcriptomic and proteomic profiling uncovers c-MYC as a critical downstream target which is translationally regulated by CNOT3. Global analysis of mRNA features demonstrates that CNOT3 selectively influences expression of target genes in a codon usage dependent manner. Furthermore, CNOT3 associates with the protein network largely consisting of ribosomal proteins and translation elongation factors in leukemia cells. Overall, our work elicits the direct requirement for translation efficiency in tumorigenesis and propose targeting the post-transcriptional circuitry via CNOT3 as a therapeutic vulnerability in AML.

摘要

蛋白质合成在肿瘤发生过程中经常失调。然而,癌症中选择性翻译控制的精确背景和这些机制的调节剂还知之甚少。在这里,我们发现 CNOT3 是 CCR4-NOT 复合物的一个亚基,是髓系白血病中翻译的重要调节剂。升高的 CNOT3 表达与急性髓系白血病 (AML) 患者的不良预后相关。CNOT3 耗竭诱导分化和凋亡,并延迟白血病发生。转录组和蛋白质组分析揭示了 c-MYC 作为一个关键的下游靶点,其翻译受到 CNOT3 的调节。对 mRNA 特征的全面分析表明,CNOT3 以依赖密码子使用的方式选择性地影响靶基因的表达。此外,CNOT3 与白血病细胞中主要由核糖体蛋白和翻译延伸因子组成的蛋白质网络相关联。总的来说,我们的工作揭示了在肿瘤发生过程中对翻译效率的直接需求,并提出通过 CNOT3 靶向转录后调控电路作为 AML 的治疗弱点。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8b0c/10943099/e57775db9302/41467_2024_46665_Fig7_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8b0c/10943099/89193218835f/41467_2024_46665_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8b0c/10943099/f99aaaf6ac2b/41467_2024_46665_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8b0c/10943099/5505976c0928/41467_2024_46665_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8b0c/10943099/050797e44355/41467_2024_46665_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8b0c/10943099/98dbeb7097a5/41467_2024_46665_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8b0c/10943099/b8742770650d/41467_2024_46665_Fig6_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8b0c/10943099/e57775db9302/41467_2024_46665_Fig7_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8b0c/10943099/89193218835f/41467_2024_46665_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8b0c/10943099/f99aaaf6ac2b/41467_2024_46665_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8b0c/10943099/5505976c0928/41467_2024_46665_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8b0c/10943099/050797e44355/41467_2024_46665_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8b0c/10943099/98dbeb7097a5/41467_2024_46665_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8b0c/10943099/b8742770650d/41467_2024_46665_Fig6_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8b0c/10943099/e57775db9302/41467_2024_46665_Fig7_HTML.jpg

相似文献

[1]
Translation efficiency driven by CNOT3 subunit of the CCR4-NOT complex promotes leukemogenesis.

Nat Commun. 2024-3-15

[2]
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[3]
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[4]
Involvement of CNOT3 in mitotic progression through inhibition of MAD1 expression.

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[5]
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J Inflamm Res. 2024-8-15

[6]
CNOT3-Dependent mRNA Deadenylation Safeguards the Pluripotent State.

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[7]
Targeting the up-regulated CNOT3 reverses therapeutic resistance and metastatic progression of EGFR-mutant non-small cell lung cancer.

Cell Death Discov. 2023-11-2

[8]
Interaction of CCR4-NOT with EBF1 regulates gene-specific transcription and mRNA stability in B lymphopoiesis.

Genes Dev. 2016-10-15

[9]
Publisher Correction: Translation efficiency driven by CNOT3 subunit of the CCR4-NOT complex promotes leukemogenesis.

Nat Commun. 2024-10-7

[10]
Knockdown of CNOT3, a subunit of the CCR4-NOT deadenylase complex, sensitizes A549 human non-small cell lung cancer cells to senescence-inducing stimuli.

Biochem Biophys Res Commun. 2025-2-8

引用本文的文献

[1]
Uridine as a hub in cancer metabolism and RNA biology.

Exp Mol Med. 2025-8-14

[2]
Nanopore direct RNA sequencing of human transcriptomes reveals the complexity of mRNA modifications and crosstalk between regulatory features.

Cell Genom. 2025-6-11

[3]
Revealing the hidden RBP-RNA interactions with RNA modification enzyme-based strategies.

Wiley Interdiscip Rev RNA. 2024

本文引用的文献

[1]
Roles of the CCR4-Not complex in translation and dynamics of co-translation events.

Wiley Interdiscip Rev RNA. 2023-11-27

[2]
Specific recognition and ubiquitination of translating ribosomes by mammalian CCR4-NOT.

Nat Struct Mol Biol. 2023-9

[3]
Mechanism of ribosome-associated mRNA degradation during tubulin autoregulation.

Mol Cell. 2023-7-6

[4]
mRNA Regulation by RNA Modifications.

Annu Rev Biochem. 2023-6-20

[5]
RNA modifications in hematological malignancies.

Int J Hematol. 2023-6

[6]
RNA deadenylation complexes in development and diseases.

Biochem Cell Biol. 2023-4-1

[7]
Two isoleucyl tRNAs that decode synonymous codons divergently regulate breast cancer metastatic growth by controlling translation of proliferation-regulating genes.

Nat Cancer. 2022-12

[8]
Emerging functions of tRNA modifications in mRNA translation and diseases.

J Genet Genomics. 2023-4

[9]
Regulation of the multisubunit CCR4-NOT deadenylase in the initiation of mRNA degradation.

Curr Opin Struct Biol. 2022-12

[10]
Integrative analysis of drug response and clinical outcome in acute myeloid leukemia.

Cancer Cell. 2022-8-8

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