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适应力强的 SEC-SAXS 数据采集可提高溶液中结构分析的质量。

Adaptable SEC-SAXS data collection for higher quality structure analysis in solution.

机构信息

Stanford Synchrotron Radiation Lightsource, SLAC National Accelerator Laboratory, Menlo Park, California, USA.

Department of Biochemistry and Physiology, University of Oklahoma Health Sciences Center, Oklahoma City, Oklahoma, USA.

出版信息

Protein Sci. 2024 Apr;33(4):e4946. doi: 10.1002/pro.4946.

Abstract

The two major challenges in synchrotron size-exclusion chromatography coupled in-line with small-angle x-ray scattering (SEC-SAXS) experiments are the overlapping peaks in the elution profile and the fouling of radiation-damaged materials on the walls of the sample cell. In recent years, many post-experimental analyses techniques have been developed and applied to extract scattering profiles from these problematic SEC-SAXS data. Here, we present three modes of data collection at the BioSAXS Beamline 4-2 of the Stanford Synchrotron Radiation Lightsource (SSRL BL4-2). The first mode, the High-Resolution mode, enables SEC-SAXS data collection with excellent sample separation and virtually no additional peak broadening from the UHPLC UV detector to the x-ray position by taking advantage of the low system dispersion of the UHPLC. The small bed volume of the analytical SEC column minimizes sample dilution in the column and facilitates data collection at higher sample concentrations with excellent sample economy equal to or even less than that of the conventional equilibrium SAXS method. Radiation damage problems during SEC-SAXS data collection are evaded by additional cleaning of the sample cell after buffer data collection and avoidance of unnecessary exposures through the use of the x-ray shutter control options, allowing sample data collection with a clean sample cell. Therefore, accurate background subtraction can be performed at a level equivalent to the conventional equilibrium SAXS method without requiring baseline correction, thereby leading to more reliable downstream structural analysis and quicker access to new science. The two other data collection modes, the High-Throughput mode and the Co-Flow mode, add agility to the planning and execution of experiments to efficiently achieve the user's scientific objectives at the SSRL BL4-2.

摘要

在同步辐射大小排阻色谱在线与小角度 X 射线散射(SEC-SAXS)实验中,面临的两个主要挑战是洗脱轮廓中的重叠峰和辐射损伤材料在样品池壁上的污垢。近年来,已经开发并应用了许多实验后分析技术,从这些有问题的 SEC-SAXS 数据中提取散射曲线。在这里,我们介绍了在斯坦福同步辐射光源(SSRL BL4-2)的 BioSAXS 光束线 4-2 上进行数据采集的三种模式。第一种模式是高分辨率模式,通过利用超高效液相色谱(UHPLC)的低系统分散度,从 UHPLC UV 检测器到 X 射线位置实现了极好的样品分离,实际上没有额外的峰展宽,从而实现了 SEC-SAXS 数据的采集。分析 SEC 柱的小床体积最大限度地减少了柱内样品稀释,并且可以在更高的样品浓度下进行数据采集,具有极好的样品经济性,与传统的平衡 SAXS 方法相当,甚至更低。通过在缓冲液数据采集后对样品池进行额外的清洗并通过使用 X 射线快门控制选项避免不必要的曝光,规避了 SEC-SAXS 数据采集过程中的辐射损伤问题,从而可以使用清洁的样品池进行样品数据采集。因此,可以在与传统平衡 SAXS 方法相当的水平上进行准确的背景扣除,而无需基线校正,从而可以进行更可靠的下游结构分析并更快地获得新的科学成果。另外两种数据采集模式,高通量模式和共流模式,为在 SSRL BL4-2 上规划和执行实验增加了灵活性,以有效地实现用户的科学目标。

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