Chien Chun-Wei, Tang Yen-An, Jeng Shuen-Lin, Pan Hsien-An, Sun H Sunny
Center for Genomic Medicine, Innovation Headquarters, National Cheng Kung University, Tainan, Taiwan.
Institute of Molecular Medicine, College of Medicine, National Cheng Kung University, Tainan, Taiwan.
Hum Reprod Open. 2024 Feb 24;2024(2):hoae012. doi: 10.1093/hropen/hoae012. eCollection 2024.
Do embryos with longer telomere length (TL) at the blastocyst stage have a higher capacity to survive after frozen-thawed embryo transfer (FET)?
Digitally estimated TL using low-pass whole genome sequencing (WGS) data from the preimplantation genetic testing for aneuploidy (PGT-A) process demonstrates that blastocyst TL is the most essential factor associated with likelihood of implantation.
The lifetime TL is established in the early cleavage cycles following fertilization through a recombination-based lengthening mechanism and starts erosion beyond the blastocyst stage. In addition, a telomerase-mediated slow erosion of TL in human fetuses has been observed from a gestational age of 6-11 weeks. Finally, an abnormal shortening of telomeres is likely involved in embryo loss during early development.
Blastocyst samples were obtained from patients who underwent PGT-A and FET in an IVF center from March 2015 to May 2018. Digitally estimated mitochondrial copy number (mtCN) and TL were used to study associations with the implantation potential of each embryo.
PARTICIPANTS/MATERIALS SETTING AND METHODS: In total, 965 blastocysts from 232 cycles (164 patients) were available to investigate the biological and clinical relevance of TL. A WGS-based workflow was applied to determine the ploidy of each embryo. Data from low-pass WGS-PGT-A were used to estimate the mtCN and TL for each embryo. Single-variant and multi-variant logistic regression, decision tree, and random forest models were applied to study various factors in association with the implantation potential of each embryo.
Of the 965 blastocysts originally available, only 216 underwent FET. While mtCN from the transferred embryos is significantly associated with the ploidy call of each embryo, mtCN has no role in impacting IVF outcomes after an embryo transfer in these women. The results indicate that mtCN is a marker of embryo aneuploidy. On the other hand, digitally estimated TL is the most prominent univariant factor and showed a significant positive association with pregnancy outcomes ( < 0.01, odds ratio 79.1). We combined several maternal and embryo parameters to study the joint effects on successful implantation. The machine learning models, namely decision tree and random forest, were trained and yielded classification accuracy of 0.82 and 0.91, respectively. Taken together, these results support the vital role of TL in governing implantation potential, perhaps through the ability to control embryo survival after transfer.
The small sample size limits our study as only 216 blastocysts were transferred. The number was further reduced to 153 blastocysts, where pregnancy outcomes could be accurately traced. The other limitation of this study is that all data were collected from a single IVF center. The uniform and controlled operation of IVF cycles in a single center may cause selection bias.
We present novel findings to show that digitally estimated TL at the blastocyst stage is a predictor of pregnancy capacity after a FET cycle. As elective single-embryo transfer has become the mainstream direction in reproductive medicine, prioritizing embryos based on their implantation potential is crucial for clinical infertility treatment in order to reduce twin pregnancy rate and the time to pregnancy in an IVF center. The AI-powered, random forest prediction model established in this study thus provides a way to improve clinical practice and optimize the chances for people with fertility problems to achieve parenthood.
STUDY FUNDING/COMPETING INTERESTS: This study was supported by a grant from the National Science and Technology Council, Taiwan (MOST 108-2321-B-006-013 -). There were no competing interests.
N/A.
囊胚期端粒长度(TL)较长的胚胎在冻融胚胎移植(FET)后存活能力是否更高?
使用来自非整倍体植入前基因检测(PGT-A)过程的低通量全基因组测序(WGS)数据进行数字估计的TL表明,囊胚TL是与着床可能性相关的最关键因素。
受精后的早期卵裂周期通过基于重组的延长机制确定终身TL,并且在囊胚期之后开始缩短。此外,从妊娠6-11周开始观察到人类胎儿中端粒酶介导的TL缓慢缩短。最后,端粒异常缩短可能与早期发育过程中的胚胎丢失有关。
从2015年3月至2018年5月在一家体外受精(IVF)中心接受PGT-A和FET的患者中获取囊胚样本。使用数字估计的线粒体拷贝数(mtCN)和TL来研究与每个胚胎着床潜力的关联。
参与者/材料设置和方法:总共965个来自232个周期(164名患者)的囊胚可用于研究TL的生物学和临床相关性。应用基于WGS的工作流程来确定每个胚胎的倍性。来自低通量WGS-PGT-A的数据用于估计每个胚胎的mtCN和TL。应用单变量和多变量逻辑回归、决策树和随机森林模型来研究与每个胚胎着床潜力相关的各种因素。
在最初可用的965个囊胚中,只有216个接受了FET。虽然移植胚胎的mtCN与每个胚胎的倍性调用显著相关,但mtCN在这些女性胚胎移植后的体外受精结果中没有影响作用。结果表明mtCN是胚胎非整倍体的标志物。另一方面,数字估计的TL是最突出的单变量因素,并且与妊娠结局呈显著正相关(<0.01,优势比79.1)。我们结合了几个母体和胚胎参数来研究对成功着床的联合影响。训练了决策树和随机森林等机器学习模型,分类准确率分别为0.82和0.91。综上所述,这些结果支持了TL在控制着床潜力方面的重要作用,可能是通过控制移植后胚胎存活的能力。
样本量小限制了我们的研究,因为仅移植了216个囊胚。数量进一步减少到153个囊胚,在这些囊胚中可以准确追踪妊娠结局。本研究的另一个局限性是所有数据均从单个IVF中心收集。单个中心IVF周期的统一和受控操作可能会导致选择偏倚。
我们提出了新的发现,表明囊胚期数字估计的TL是FET周期后妊娠能力的预测指标。随着选择性单胚胎移植已成为生殖医学的主流方向,根据胚胎的着床潜力对胚胎进行优先排序对于临床不孕症治疗至关重要,以降低IVF中心的双胎妊娠率和缩短妊娠时间。因此,本研究中建立的人工智能驱动的随机森林预测模型提供了一种改进临床实践的方法,并优化了有生育问题的人实现为人父母的机会。
研究资金/竞争利益:本研究得到了台湾国家科学技术委员会的资助(MOST 108-2321-B-006-013 -)。没有竞争利益。
无。