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从健康供体粪便中分离出的三杂交菌株的基因组序列草图。

Draft genome sequence of a triple hybrid strain isolated from a healthy donor feces.

作者信息

Ortega-Enríquez Judith Z, Arenas-Hernández Margarita M P, Barrios-Villa Edwin

机构信息

Laboratorio de Biología Molecular y Genómica, Departamento de Ciencias Químico Biológicas y Agropecuarias, Universidad de Sonora, Campus Caborca. Av. Universidad e Irigoyen S/N, H. Caborca, Sonora, Mexico.

Posgrado en Microbiología, Centro de Investigaciones en Ciencias Microbiológicas, Benemérita Universidad Autónoma de Puebla, Ciudad Universitaria, Puebla, Mexico.

出版信息

Microbiol Resour Announc. 2024 Mar 26;13(5):e0011324. doi: 10.1128/mra.00113-24.

DOI:10.1128/mra.00113-24
PMID:38530041
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11080531/
Abstract

Herein is reported the draft genome sequence of a triple hybrid strain isolated from a healthy donor feces. The assembly is 5.2 Mbp, composed of 247 contigs, with a N of 77, 241 bp, presenting a GC content of 50.8%.

摘要

本文报道了从健康供体粪便中分离出的三杂交菌株的基因组序列草图。该组装序列为5.2 Mbp,由247个重叠群组成,N值为77,241 bp,GC含量为50.8%。

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本文引用的文献

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2
Distinguishing Pathovars from Nonpathovars: Escherichia coli.鉴别病原株与非病原株:大肠杆菌。
Microbiol Spectr. 2020 Dec;8(4). doi: 10.1128/microbiolspec.AME-0014-2020.
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Prevalence and antimicrobial resistance of shiga toxin-producing and enteropathogenic isolated from patients with acute diarrhea.从急性腹泻患者中分离出的产志贺毒素和肠致病性的流行情况及抗菌药物耐药性
Iran J Microbiol. 2018 Jun;10(3):151-157.
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A highly specific Escherichia coli qPCR and its comparison with existing methods for environmental waters.一种高度特异性的大肠杆菌 qPCR 及其与现有环境水样方法的比较。
Water Res. 2017 Dec 1;126:101-110. doi: 10.1016/j.watres.2017.08.032. Epub 2017 Aug 25.
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Diarrheagenic Escherichia coli.致泻性大肠杆菌
Braz J Microbiol. 2016 Dec;47 Suppl 1(Suppl 1):3-30. doi: 10.1016/j.bjm.2016.10.015. Epub 2016 Nov 5.
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Diffusely adherent Escherichia coli strains isolated from children and adults constitute two different populations.从儿童和成人中分离出的弥漫性粘附型大肠杆菌菌株构成了两个不同的群体。
BMC Microbiol. 2013 Feb 1;13:22. doi: 10.1186/1471-2180-13-22.
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J Comput Biol. 2012 May;19(5):455-77. doi: 10.1089/cmb.2012.0021. Epub 2012 Apr 16.
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Single multiplex assay to identify simultaneously enteropathogenic, enteroaggregative, enterotoxigenic, enteroinvasive and Shiga toxin-producing Escherichia coli strains in Brazilian children.用于同时鉴定巴西儿童中致病性大肠杆菌、聚集性大肠杆菌、产肠毒素大肠杆菌、侵袭性大肠杆菌和产志贺毒素大肠杆菌菌株的单一多重检测法。
FEMS Microbiol Lett. 2007 Feb;267(2):145-50. doi: 10.1111/j.1574-6968.2006.00580.x.
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Evaluation of multiplex PCRs for diagnosis of infection with diarrheagenic Escherichia coli and Shigella spp.用于诊断致泻性大肠杆菌和志贺氏菌属感染的多重聚合酶链反应评估
J Clin Microbiol. 2004 Dec;42(12):5849-53. doi: 10.1128/JCM.42.12.5849-5853.2004.
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