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家蝇过氧化物酶的计算机识别与表达分析。

In silico identification and expression analyses of peroxidases in Tenebrio molitor.

机构信息

Department of Biology, College of Natural Sciences, Soonchunhyang University, Asan, Chungnam, Republic of Korea.

Korea Native Animal Resources Utilization Convergence Research Institute (KNAR), Soonchunhyang University, Asan, Chungnam, Republic of Korea.

出版信息

Genes Genomics. 2024 May;46(5):601-611. doi: 10.1007/s13258-024-01498-7. Epub 2024 Mar 28.

Abstract

Human advancements in agriculture, urbanization, and industrialization have led to various forms of environmental pollution, including heavy metal pollution. Insects, as highly adaptable organisms, can survive under various environmental stresses, which induce oxidative damage and impair antioxidant systems. To investigate the peroxidase (POX) family in Tenebrio molitor, we characterized two POXs, namely TmPOX-iso1 and TmPOX-iso2. The full-length cDNA sequences of TmPox-iso1 and TmPox-iso2 respectively consisted of an open reading frame of 1815 bp encoding 605 amino acids and an open reading frame of 2229 bp encoding 743 amino acids. TmPOX-iso1 and TmPOX-iso2 homologs were found in five distinct insect orders. In the phylogenetic tree analysis, TmPOX-iso1 was clustered with the predicted POX protein of T. castaneum, and TmPOX-iso2 was clustered with the POX precursor protein of T. castaneum. During development, the highest expression level of TmPox-iso1 was observed in the pre-pupal stage, while that of TmPox-iso2 expression were observed in the pre-pupal and 4-day pupal stages. TmPox-iso1 was primarily expressed in the early and late larval gut, while TmPox-iso2 mRNA expression was higher in the fat bodies and Malpighian tubules. In response to cadmium chloride treatment, TmPox-iso1 expression increased at 3 hours and then declined until 24 hours, while in the zinc chloride-treated group, TmPox-iso1 expression peaked 24 hours after the treatment. Both treated groups showed increases in TmPox-iso2 expression 24 hours after the treatments.

摘要

人类在农业、城市化和工业化方面的进步导致了各种形式的环境污染,包括重金属污染。昆虫作为高度适应性的生物,可以在各种环境压力下生存,这些压力会导致氧化损伤并损害抗氧化系统。为了研究黄粉虫中的过氧化物酶(POX)家族,我们对两种 POX 进行了表征,即 TmPOX-iso1 和 TmPOX-iso2。TmPox-iso1 和 TmPox-iso2 的全长 cDNA 序列分别包含一个 1815bp 的开放阅读框,编码 605 个氨基酸和一个 2229bp 的开放阅读框,编码 743 个氨基酸。在五个不同的昆虫目中发现了 TmPOX-iso1 和 TmPOX-iso2 的同源物。在系统发育树分析中,TmPOX-iso1 与预测的 T. castaneum POX 蛋白聚类,而 TmPOX-iso2 与 T. castaneum 的 POX 前体蛋白聚类。在发育过程中,TmPox-iso1 的最高表达水平出现在预蛹期,而 TmPox-iso2 的表达水平出现在预蛹期和 4 日龄蛹期。TmPox-iso1 主要在早期和晚期幼虫肠道中表达,而 TmPox-iso2 mRNA 表达在脂肪体和马氏管中较高。在氯化镉处理后,TmPox-iso1 的表达在 3 小时增加,然后下降直到 24 小时,而在锌处理组中,TmPox-iso1 的表达在处理后 24 小时达到峰值。两个处理组在处理后 24 小时均显示 TmPox-iso2 表达增加。

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