Suppr超能文献

Cryo-EM 映射各向异性可以通过映射后处理和一种新的估计方法来减弱。

Cryo-EM Map Anisotropy Can Be Attenuated by Map Post-Processing and a New Method for Its Estimation.

机构信息

Department of Statistics, University of Oxford, 24-29 St Giles', Oxford OX1 3LB, UK.

Department of Chemistry-Ångström, Uppsala University, Box 523, SE 751 20 Uppsala, Sweden.

出版信息

Int J Mol Sci. 2024 Apr 2;25(7):3959. doi: 10.3390/ijms25073959.

Abstract

One of the most important challenges in cryogenic electron microscopy (cryo-EM) is the substantial number of samples that exhibit preferred orientations, which leads to an uneven coverage of the projection sphere. As a result, the overall quality of the reconstructed maps can be severely affected, as manifested by the presence of anisotropy in the map resolution. Several methods have been proposed to measure the directional resolution of maps in tandem with experimental protocols to address the problem of preferential orientations in cryo-EM. Following these works, in this manuscript we identified one potential limitation that may affect most of the existing methods and we proposed an alternative approach to evaluate the presence of preferential orientations in cryo-EM reconstructions. In addition, we also showed that some of the most recently proposed cryo-EM map post-processing algorithms can attenuate map anisotropy, thus offering alternative visualization opportunities for cases affected by moderate levels of preferential orientations.

摘要

在低温电子显微镜(cryo-EM)中,一个重要的挑战是大量的样本表现出优先取向,这导致投影球的覆盖不均匀。因此,重构图谱的整体质量会受到严重影响,表现为图谱分辨率存在各向异性。已经提出了几种方法来测量图谱的定向分辨率,并与实验方案相结合,以解决 cryo-EM 中优先取向的问题。在这些工作的基础上,在本手稿中,我们确定了一个可能影响大多数现有方法的潜在限制,并提出了一种替代方法来评估 cryo-EM 重构中优先取向的存在。此外,我们还表明,一些最近提出的 cryo-EM 图谱后处理算法可以减弱图谱各向异性,从而为受中度优先取向影响的情况提供替代可视化机会。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4c8e/11012471/c968276edd3a/ijms-25-03959-g001.jpg

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验