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生物钟调控的病毒感染和免疫反应的数学建模。

Mathematical modeling of viral infection and the immune response controlled by the circadian clock.

机构信息

The State Key Laboratory for Artificial Microstructures and Mesoscopic Physics, School of Physics, Peking University, Beijing, 100871, China.

Center for Quantitative Biology, Peking University, Beijing, 100871, China.

出版信息

J Biol Phys. 2024 Jun;50(2):197-214. doi: 10.1007/s10867-024-09655-5. Epub 2024 Apr 20.

DOI:10.1007/s10867-024-09655-5
PMID:38641676
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11106228/
Abstract

Time of day affects how well the immune system responds to viral or bacterial infections. While it is well known that the immune system is regulated by the circadian clock, the dynamic origin of time-of-day-dependent immunity remains unclear. In this paper, we studied the circadian control of immune response upon infection of influenza A virus through mathematical modeling. Dynamic simulation analyses revealed that the time-of-day-dependent immunity was rooted in the relative phase between the circadian clock and the pulse of viral infection. The relative phase, which depends on the time the infection occurs, plays a crucial role in the immune response. It can drive the immune system to one of two distinct bistable states, a high inflammatory state with a higher mortality rate or a safe state characterized by low inflammation. The mechanism we found here also explained why the same species infected by different viruses has different time-of-day-dependent immunities. Further, the time-of-day-dependent immunity was found to be abolished when the immune system was regulated by an impaired circadian clock with decreased oscillation amplitude or without oscillations.

摘要

昼夜节律会影响免疫系统对病毒或细菌感染的反应能力。虽然人们已经知道免疫系统受到生物钟的调节,但昼夜节律依赖性免疫的动态起源尚不清楚。在本文中,我们通过数学建模研究了流感病毒感染时免疫反应的昼夜节律控制。动态模拟分析表明,昼夜节律依赖性免疫源于生物钟和病毒感染脉冲之间的相对相位。相对相位取决于感染发生的时间,在免疫反应中起着至关重要的作用。它可以将免疫系统推向两种截然不同的双稳态之一,即炎症水平较高、死亡率较高的高炎症状态,或炎症水平较低的安全状态。我们在这里发现的机制也解释了为什么同一物种感染不同的病毒会产生不同的昼夜节律依赖性免疫。此外,当免疫系统受到生物钟调节受损、振荡幅度降低或没有振荡时,昼夜节律依赖性免疫会被消除。

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本文引用的文献

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Influence of circadian clocks on adaptive immunity and vaccination responses.生物钟对适应性免疫和疫苗应答的影响。
Nat Commun. 2023 Jan 30;14(1):476. doi: 10.1038/s41467-023-35979-2.
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The circadian immune system.生物钟免疫系统。
Sci Immunol. 2022 Jun 3;7(72):eabm2465. doi: 10.1126/sciimmunol.abm2465.
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The circadian clock component BMAL1 regulates SARS-CoV-2 entry and replication in lung epithelial cells.生物钟组件BMAL1调节严重急性呼吸综合征冠状病毒2(SARS-CoV-2)在肺上皮细胞中的进入和复制。
iScience. 2021 Oct 22;24(10):103144. doi: 10.1016/j.isci.2021.103144. Epub 2021 Sep 16.
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Dynamically linking influenza virus infection kinetics, lung injury, inflammation, and disease severity.动态关联流感病毒感染动力学、肺损伤、炎症和疾病严重程度。
Elife. 2021 Jul 20;10:e68864. doi: 10.7554/eLife.68864.
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Daytime variation in SARS-CoV-2 infection and cytokine production.SARS-CoV-2 感染和细胞因子产生的日间变化。
Microb Pathog. 2021 Sep;158:105067. doi: 10.1016/j.micpath.2021.105067. Epub 2021 Jun 24.
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Modeling the circadian regulation of the immune system: Sexually dimorphic effects of shift work.生物钟对免疫系统的调节作用建模:轮班工作的性别二态性影响。
PLoS Comput Biol. 2021 Mar 31;17(3):e1008514. doi: 10.1371/journal.pcbi.1008514. eCollection 2021 Mar.
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Circadian control of hepatitis B virus replication.昼夜节律对乙型肝炎病毒复制的控制。
Nat Commun. 2021 Mar 12;12(1):1658. doi: 10.1038/s41467-021-21821-0.
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Clocks, Viruses, and Immunity: Lessons for the COVID-19 Pandemic.时钟、病毒与免疫:新冠疫情的启示
J Biol Rhythms. 2021 Feb;36(1):23-34. doi: 10.1177/0748730420987669. Epub 2021 Jan 22.
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The Circadian Clock and Viral Infections.昼夜节律钟与病毒感染。
J Biol Rhythms. 2021 Feb;36(1):9-22. doi: 10.1177/0748730420967768. Epub 2020 Nov 9.
10
Molecular Interactions Between Components of the Circadian Clock and the Immune System.生物钟组件与免疫系统之间的分子相互作用。
J Mol Biol. 2020 May 29;432(12):3700-3713. doi: 10.1016/j.jmb.2019.12.044. Epub 2020 Jan 10.