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感染人类肠道的新型烈性噬菌体PMBT24的全基因组序列

Complete genome sequence of the novel virulent phage PMBT24 infecting from the human gut.

作者信息

Sprotte Sabrina, Brinks Erik, Neve Horst, Franz Charles M A P

机构信息

Department of Microbiology and Biotechnology, Max Rubner-Institut, Federal Research Institute of Nutrition and Food, Hermann-Weigmann-Str. 1, 24103, Kiel, Germany.

出版信息

Heliyon. 2024 Apr 5;10(8):e28813. doi: 10.1016/j.heliyon.2024.e28813. eCollection 2024 Apr 30.

DOI:10.1016/j.heliyon.2024.e28813
PMID:38655313
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11035940/
Abstract

PMBT24, the first reported virulent bacteriophage infecting the anaerobic human gut bacterium strain MBT-21, was isolated from a municipal sewage sample and its genome was sequenced and analysed. Transmission electron microscopy revealed a phage with an icosahedral head and a long, non-contractile tail. The circularly permutated, 99,962-bp dsDNA genome of the type phage has a mol% G + C content of 32.1 and comprises 173 putative ORFs. Using amino acid sequence-based phylogeny, phage PMBT24 showed similarity to other, hitherto non-published phage genomes in the databases. Our data suggested phage PMBT24 to present the type phage of a novel genus (proposed name Kielvirus) and novel family of phages (proposed name Kielviridae).

摘要

PMBT24是首个被报道的可感染人类厌氧肠道细菌MBT - 21菌株的烈性噬菌体,它从城市污水样本中分离出来,其基因组已被测序和分析。透射电子显微镜显示该噬菌体具有二十面体头部和一条长的、非收缩性的尾部。该噬菌体类型的环状排列的99,962碱基对双链DNA基因组的G + C摩尔百分比含量为32.1,包含173个推定的开放阅读框。基于氨基酸序列的系统发育分析表明,噬菌体PMBT24与数据库中其他尚未发表的噬菌体基因组具有相似性。我们的数据表明噬菌体PMBT24是一个新属(提议名称为Kielvirus)和噬菌体新科(提议名称为Kielviridae)的模式噬菌体。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c53e/11035940/769b741be60e/gr5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c53e/11035940/c5cbdc652d89/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c53e/11035940/89d8bb3a99e7/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c53e/11035940/f6a3602f8557/gr3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c53e/11035940/22193d887397/gr4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c53e/11035940/769b741be60e/gr5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c53e/11035940/c5cbdc652d89/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c53e/11035940/89d8bb3a99e7/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c53e/11035940/f6a3602f8557/gr3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c53e/11035940/22193d887397/gr4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c53e/11035940/769b741be60e/gr5.jpg

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