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猕猴桃富含亮氨酸重复序列受体样蛋白的全基因组鉴定与表达分析揭示其在生物和非生物胁迫响应中的作用

Genome-Wide Identification and Expression Analysis of Kiwifruit Leucine-Rich Repeat Receptor-Like Proteins Reveal Their Roles in Biotic and Abiotic Stress Responses.

作者信息

Cao Yingying, Zhang Congxiao, Liu Fang, Li Dawei, Zhang Aidi, Li Li, Zhang Xiujun

机构信息

Key Laboratory of Plant Germplasm Enhancement and Specialty Agriculture, Wuhan Botanical Garden, Chinese Academy of Sciences, Wuhan 430074, China.

Center of Economic Botany, Core Botanical Gardens, Chinese Academy of Sciences, Wuhan 430074, China.

出版信息

Int J Mol Sci. 2024 Apr 19;25(8):4497. doi: 10.3390/ijms25084497.

DOI:10.3390/ijms25084497
PMID:38674082
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11050117/
Abstract

Leucine-rich repeat receptor-like proteins (), a major group of receptor-like proteins in plants, have diverse functions in plant physiology, including growth, development, signal transduction, and stress responses. Despite their importance, the specific roles of kiwifruit in response to biotic and abiotic stresses remain poorly understood. In this study, we performed family identification, characterization, transcriptome data analysis, and differential gene expression analysis of kiwifruit . We identified totals of 101, 164, and 105 in 'Hongyang', 'Huate', and 'Red5', respectively. Synteny analysis revealed that the expansion of kiwifruit was primarily attributed to segmental duplication events. Based on RNA-seq data from pathogen-infected kiwifruits, we identified specific genes potentially involved in different stages of pathogen infection. Additionally, we observed the potential involvement of kiwifruit in abiotic stress responses, with upstream transcription factors possibly regulating their expression. Furthermore, protein interaction network analysis unveiled the participation of kiwifruit LRR-RLP in the regulatory network of abiotic stress responses. These findings highlight the crucial roles of in mediating both biotic and abiotic stress responses in kiwifruit, offering valuable insights for the breeding of stress-resistant kiwifruit varieties.

摘要

富含亮氨酸重复序列的类受体蛋白(LRR-RLP)是植物中一类主要的类受体蛋白,在植物生理学中具有多种功能,包括生长、发育、信号转导和应激反应。尽管它们很重要,但猕猴桃LRR-RLP在应对生物和非生物胁迫方面的具体作用仍知之甚少。在本研究中,我们对猕猴桃LRR-RLP进行了家族鉴定、特征分析、转录组数据分析和差异基因表达分析。我们分别在‘红阳’、‘华特’和‘红5’中鉴定出101个、164个和105个LRR-RLP。共线性分析表明,猕猴桃LRR-RLP的扩增主要归因于片段重复事件。基于病原菌感染的猕猴桃的RNA-seq数据,我们鉴定出了可能参与病原菌感染不同阶段的特定LRR-RLP基因。此外,我们观察到猕猴桃LRR-RLP可能参与非生物胁迫反应,上游转录因子可能调控它们的表达。此外,蛋白质相互作用网络分析揭示了猕猴桃LRR-RLP参与非生物胁迫反应的调控网络。这些发现突出了LRR-RLP在介导猕猴桃生物和非生物胁迫反应中的关键作用,为抗逆猕猴桃品种的选育提供了有价值的见解。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1f80/11050117/3c3f09d391e3/ijms-25-04497-g009.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1f80/11050117/8d55ae8ca3d3/ijms-25-04497-g001.jpg
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https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1f80/11050117/3ddabdb87608/ijms-25-04497-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1f80/11050117/cf2213d3accf/ijms-25-04497-g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1f80/11050117/3c3f09d391e3/ijms-25-04497-g009.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1f80/11050117/8d55ae8ca3d3/ijms-25-04497-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1f80/11050117/64da8df0c0c4/ijms-25-04497-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1f80/11050117/32d83a074cd6/ijms-25-04497-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1f80/11050117/be87173fd1d9/ijms-25-04497-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1f80/11050117/503d7be1e734/ijms-25-04497-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1f80/11050117/7f1432bd6003/ijms-25-04497-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1f80/11050117/3ddabdb87608/ijms-25-04497-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1f80/11050117/cf2213d3accf/ijms-25-04497-g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1f80/11050117/3c3f09d391e3/ijms-25-04497-g009.jpg

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