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单价和二价阳离子对缠结 DNA 流变性的影响。

Effects of monovalent and divalent cations on the rheology of entangled DNA.

机构信息

School of Physics and Astronomy, University of Edinburgh, Peter Guthrie Tait Road, Edinburgh, EH9 3FD, UK.

MRC Human Genetics Unit, Institute of Genetics and Cancer, University of Edinburgh, Edinburgh EH4 2XU, UK.

出版信息

Soft Matter. 2024 May 15;20(19):3980-3986. doi: 10.1039/d3sm00957b.

Abstract

In this paper we investigate the effects of varying cation valency and concentration on the rheology of entangled DNA solutions. We show that monovalent cations moderately increase the viscoelasticty of the solutions mainly by stabilising linear concatenation of DNA "monomers" hybridisation of their sticky ends. On the contrary, divalent cations have a far more complex and dramatic effect on the rheology of the solution and we observe evidence of inter-molecular DNA-DNA bridging by Mg. We argue that these results may be interesting in the context of dense solutions of single and double stranded DNA, or in biotechnology applications such as DNA origami and DNA hydrogels.

摘要

在本文中,我们研究了阳离子价态和浓度变化对纠缠 DNA 溶液流变性的影响。我们表明,单价阳离子通过稳定 DNA“单体”的线性串联以及它们粘性末端的杂交,适度增加了溶液的粘弹性。相反,二价阳离子对溶液的流变性有更复杂和更显著的影响,我们观察到 Mg 存在分子间 DNA-DNA 桥接的证据。我们认为,这些结果在单链和双链 DNA 的密集溶液,或 DNA 折纸术和 DNA 水凝胶等生物技术应用中可能具有重要意义。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/73e3/11095498/167bc0a9e91f/d3sm00957b-f1.jpg

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