Department of Chemistry, Syracuse University, Syracuse, New York 13244, USA.
Department of Biomedical and Chemical Engineering, Syracuse University, Syracuse, New York 13244, USA.
Soft Matter. 2024 May 15;20(19):4007-4014. doi: 10.1039/d4sm00358f.
Biology exploits biomacromolecular phase separation to form condensates, known as membraneless organelles. Despite significant advancements in deciphering sequence determinants for phase separation, modulating these features remains challenging. A promising approach inspired by biology is to use post-translational modifications (PTMs)-to modulate the amino acid physicochemistry instead of altering protein sequences-to control the formation and characteristics of condensates. However, despite the identification of more than 300 types of PTMs, the detailed understanding of how they influence the formation and material properties of protein condensates remains incomplete. In this study, we investigated how modification with myristoyl lipid alters the formation and characteristics of the resilin-like polypeptide (RLP) condensates, a prototypical disordered protein with upper critical solution temperature (UCST) phase behaviour. Using turbidimetry, dynamic light scattering, confocal and electron microscopy, we demonstrated that lipidation-in synergy with the sequence of the lipidation site-significantly influences RLPs' thermodynamic propensity for phase separation and their condensate properties. Molecular simulations suggested these effects result from an expanded hydrophobic region created by the interaction between the lipid and lipidation site rather than changes in peptide rigidity. These findings emphasize the role of "sequence context" in modifying the properties of PTMs, suggesting that variations in lipidation sequences could be strategically used to fine-tune the effect of these motifs. Our study advances understanding of lipidation's impact on UCST phase behaviour, relevant to proteins critical in biological processes and diseases, and opens avenues for designing lipidated resilins for biomedical applications like heat-mediated drug elution.
生物学利用生物大分子相分离形成凝聚物,这些凝聚物被称为无膜细胞器。尽管在破译相分离的序列决定因素方面取得了重大进展,但调节这些特征仍然具有挑战性。一种有前途的方法是受到生物学的启发,使用翻译后修饰(PTM)——调节氨基酸的物理化学性质,而不是改变蛋白质序列——来控制凝聚物的形成和特性。然而,尽管已经确定了超过 300 种类型的 PTM,但它们如何影响蛋白质凝聚物的形成和物质特性的详细理解仍然不完整。在这项研究中,我们研究了豆蔻酰脂质修饰如何改变弹性蛋白样多肽(RLP)凝聚物的形成和特性,RLP 凝聚物是一种具有上临界溶解温度(UCST)相行为的典型无序蛋白质。使用浊度法、动态光散射、共聚焦和电子显微镜,我们证明了脂质化——与脂质化位点的序列协同作用——显著影响 RLPs 相分离的热力学倾向及其凝聚物特性。分子模拟表明,这些效应是由脂质与脂质化位点之间的相互作用产生的扩展疏水区引起的,而不是肽刚性的变化。这些发现强调了“序列上下文”在修饰 PTM 特性方面的作用,表明脂质化序列的变化可以被战略性地用于微调这些基序的效果。我们的研究增进了对脂质化对 UCST 相行为的影响的理解,这与生物过程和疾病中至关重要的蛋白质有关,并为设计用于生物医学应用(如热介导药物洗脱)的脂质化弹性蛋白开辟了途径。