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源自不同细胞来源的外泌体对骨髓间充质干细胞向施万细胞分化的影响。

The effects of exosomes originating from different cell sources on the differentiation of bone marrow mesenchymal stem cells into schwann cells.

作者信息

Zhang Xianxiang, Zhang Weiwei, Sun Hao, Wang Hui

机构信息

Department of Otolaryngology and Head and Neck Surgery, Beijing Luhe Hospital, Capital Medical University, Beijing, 101101, China.

出版信息

J Nanobiotechnology. 2024 May 3;22(1):220. doi: 10.1186/s12951-024-02450-3.

Abstract

BACKGROUND

Bone marrow mesenchymal stem cells (BMSCs) can differentiate into Schwann cells (SCs) during peripheral nerve injury; in our previous research, we showed that SC-derived exosomes (SC-exos) played a direct induction role while fibroblast-derived exosomes (Fb-exos) had no obvious induction role. The induction role of neural stem cell (NSC)-derived exosomes (NSC-exos) has also been widely confirmed. However, no studies have compared the induction effects of these three types of cells at the same time. Therefore, by investigating the effect of these three cell-derived exosomes upon the induction of BMSCs to differentiate into SCs, this study explored the role of different exosomes in promoting the differentiation of stem cells into SCs cells, and conducted a comparison between the two groups by RNA sequencing to further narrow the range of target genes and related gene pathways in order to study their related mechanisms.

MATERIALS AND METHODS

We extracted exosomes from SCs, fibroblasts (Fb) and neural stem cells (NSC) and then investigated the ability of these exosomes to induce differentiation into BMSCs under different culture conditions. The expression levels of key proteins and gene markers were detected in induced cells by fluorescence immunoassays, western blotting and polymerase chain reaction (PCR); then, we statistically compared the relative induction effects under different conditions. Finally, we analyzed the three types of exosomes by RNA-seq to predict target genes and related gene pathways.

RESULTS

BMSCs were cultured by three media: conventional (no induction), pre-induction or pre-induction + original induction medium (ODM) with exosomes of the same cell origin under different culture conditions. When adding the three different types of exosomes separately, the overall induction of BMSCs to differentiate into SCs was significantly increased (P < 0.05). The induction ability was ranked as follows: pre-induction + ODM + exosome group > pre-induction + exosome group > non-induction + exosome group. Using exosomes from different cell sources under the same culture conditions, we observed the following trends under the three culture conditions: RSC96-exos group ≥ NSC-exos group > Fb-exos group. The overall ability to induce BMSCs into SCs was significantly greater in the RSC96-exos group and the NSC-exos group. Although there was no significant difference in induction efficiency when comparing these two groups, the overall induction ability of the RSC96-exos group was slightly higher than that of the NSC-exos group. By combining the differentiation induction results with the RNA-seq data, the three types of exosomes were divided into three comparative groups: RSC vs. NSC, RSC vs. Fb and NSC vs. Fb. We identified 203 differentially expressed mRNA target genes in these three groups. Two differentially expressed genes were upregulated simultaneously, namely riboflavin kinase (RFK, ENSRNOG00000022273) and ribosomal RNA processing 36 (Rrp36, ENSRNOG00000017836). We did not identify any co-upregulated target genes for the miRNAs, but did identify one target gene of the lncRNAs, namely ENSRNOG00000065005. Analysis identified 90 GO terms related to nerves and axons in the mRNAs; in addition, KEGG enrichment and GASA analysis identified 13 common differential expression pathways in the three groups.

CONCLUSIONS

Our analysis found that pre-induction + ODM + RSC96/NSC-exos culture conditions were most conducive with regards to induction and differentiation. RSC96-exos and NSC-exos exhibited significantly greater differentiation efficiency of BMSCs into SCs. Although there was no statistical difference, the data indicated a trend for RSC96-exos to be advantageous We identified 203 differentially expressed mRNAs between the three groups and two differentially expressed target mRNAs were upregulated, namely riboflavin kinase (RFK, ENSRNOG00000022273) and ribosomal RNA processing 36 (Rrp36, ENSRNOG00000017836). 90 GO terms were related to nerves and axons. Finally, we identified 13 common differentially expressed pathways across our three types of exosomes. It is hoped that the efficiency of BMSCs induction differentiation into SCs can be improved, bringing hope to patients and more options for clinical treatment.

摘要

背景

骨髓间充质干细胞(BMSCs)在外周神经损伤时可分化为雪旺细胞(SCs);在我们之前的研究中,我们发现SCs来源的外泌体(SC-exos)发挥直接诱导作用,而成纤维细胞来源的外泌体(Fb-exos)没有明显的诱导作用。神经干细胞(NSCs)来源的外泌体(NSC-exos)的诱导作用也已得到广泛证实。然而,尚无研究同时比较这三种细胞的诱导作用。因此,本研究通过探究这三种细胞来源的外泌体对BMSCs向SCs分化的诱导作用,探讨不同外泌体在促进干细胞向SCs分化中的作用,并通过RNA测序对两组进行比较,以进一步缩小靶基因和相关基因通路的范围,从而研究其相关机制。

材料与方法

我们从SCs、成纤维细胞(Fb)和神经干细胞(NSCs)中提取外泌体,然后研究这些外泌体在不同培养条件下诱导BMSCs分化的能力。通过荧光免疫分析、蛋白质印迹法和聚合酶链反应(PCR)检测诱导细胞中关键蛋白和基因标志物的表达水平;然后,我们对不同条件下的相对诱导作用进行统计学比较。最后,我们通过RNA测序分析这三种类型的外泌体,以预测靶基因和相关基因通路。

结果

在不同培养条件下,用三种培养基培养BMSCs:常规培养基(无诱导)、预诱导培养基或预诱导培养基 + 原始诱导培养基(ODM),并添加相同细胞来源的外泌体。分别添加三种不同类型的外泌体时,BMSCs向SCs分化的总体诱导率显著提高(P < 0.05)。诱导能力排序如下:预诱导 + ODM + 外泌体组 > 预诱导 + 外泌体组 > 非诱导 + 外泌体组。在相同培养条件下使用不同细胞来源的外泌体,在三种培养条件下我们观察到以下趋势:RSC96-exos组≥NSC-exos组 > Fb-exos组。RSC96-exos组和NSC-exos组诱导BMSCs成为SCs的总体能力显著更强。虽然比较这两组时诱导效率无显著差异,但RSC96-exos组的总体诱导能力略高于NSC-exos组。通过将分化诱导结果与RNA测序数据相结合,将三种类型的外泌体分为三个比较组:RSC与NSC、RSC与Fb、NSC与Fb。我们在这三组中鉴定出203个差异表达的mRNA靶基因。有两个差异表达基因同时上调,即核黄素激酶(RFK,ENSRNOG00000022273)和核糖体RNA加工36(Rrp36,ENSRNOG00000017836)。我们未鉴定出miRNAs的任何共同上调靶基因,但鉴定出lncRNAs的一个靶基因,即ENSRNOG00000065005。分析确定mRNA中有90个与神经和轴突相关的基因本体(GO)术语;此外,KEGG富集和GASA分析确定三组中有13条共同的差异表达通路。

结论

我们的分析发现,预诱导 + ODM + RSC96/NSC-exos培养条件最有利于诱导分化。RSC96-exos和NSC-exos对BMSCs向SCs的分化效率显著更高。虽然无统计学差异,但数据表明RSC96-exos有优势趋势。我们在三组之间鉴定出203个差异表达的mRNA,且有两个差异表达的靶mRNA上调,即核黄素激酶(RFK,ENSRNOG00000022273)和核糖体RNA加工36(Rrp36,ENSRNOG00000017836)。90个GO术语与神经和轴突相关。最后,我们在三种类型的外泌体中鉴定出13条共同的差异表达通路。希望能提高BMSCs诱导分化为SCs的效率,为患者带来希望并为临床治疗提供更多选择。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5158/11067703/1a2f99b9dbd8/12951_2024_2450_Fig1_HTML.jpg

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