Laboratório de Micologia Médica (LIM53), Instituto de Medicina Tropical (IMT), Faculdade de Medicina (FMUSP), Universidade de São Paulo, São Paulo, SP, Brazil.
Laboratório de Medicina Laboratorial (LIM03), Hospital das Clínicas da Faculdade de Medicina (HCFMUSP), Universidade de São Paulo, São Paulo, SP, Brazil.
Sci Rep. 2024 May 16;14(1):11247. doi: 10.1038/s41598-024-61174-4.
We assessed predictive models (PMs) for diagnosing Pneumocystis jirovecii pneumonia (PCP) in AIDS patients seen in the emergency room (ER), aiming to guide empirical treatment decisions. Data from suspected PCP cases among AIDS patients were gathered prospectively at a reference hospital's ER, with diagnoses later confirmed through sputum PCR analysis. We compared clinical, laboratory, and radiological data between PCP and non-PCP groups, using the Boruta algorithm to confirm significant differences. We evaluated ten PMs tailored for various ERs resource levels to diagnose PCP. Four scenarios were created, two based on X-ray findings (diffuse interstitial infiltrate) and two on CT scans ("ground-glass"), incorporating mandatory variables: lactate dehydrogenase, O2, C-reactive protein, respiratory rate (> 24 bpm), and dry cough. We also assessed HIV viral load and CD4 cell count. Among the 86 patients in the study, each model considered either 6 or 8 parameters, depending on the scenario. Many models performed well, with accuracy, precision, recall, and AUC scores > 0.8. Notably, nearest neighbor and naïve Bayes excelled (scores > 0.9) in specific scenarios. Surprisingly, HIV viral load and CD4 cell count did not improve model performance. In conclusion, ER-based PMs using readily available data can significantly aid PCP treatment decisions in AIDS patients.
我们评估了用于在急诊室(ER)中诊断 AIDS 患者肺囊虫肺炎(PCP)的预测模型(PMs),旨在指导经验性治疗决策。在一家参考医院的 ER 前瞻性地收集疑似 PCP 病例的 AIDS 患者数据,通过痰 PCR 分析来确认诊断。我们比较了 PCP 和非 PCP 组之间的临床、实验室和影像学数据,使用 Boruta 算法来确认显著差异。我们评估了针对不同 ER 资源水平量身定制的十种 PMs 来诊断 PCP。创建了四种情况,两种基于 X 射线结果(弥漫性间质浸润),两种基于 CT 扫描(“磨玻璃样”),包含强制性变量:乳酸脱氢酶、O2、C 反应蛋白、呼吸频率(>24 bpm)和干咳。我们还评估了 HIV 病毒载量和 CD4 细胞计数。在研究的 86 名患者中,每种模型根据情况考虑了 6 或 8 个参数。许多模型表现良好,准确性、精度、召回率和 AUC 评分均>0.8。值得注意的是,最近邻和朴素贝叶斯在特定情况下表现出色(评分>0.9)。令人惊讶的是,HIV 病毒载量和 CD4 细胞计数并没有提高模型性能。总之,基于 ER 的 PMs 使用现成的数据可以显著帮助 AIDS 患者的 PCP 治疗决策。