College of Pharmacy, Keimyung University, 1095 Dalgubeoldaero, Dalseo-gu, Daegu, 42601, South Korea.
Curr Microbiol. 2024 May 17;81(7):178. doi: 10.1007/s00284-024-03715-8.
A novel Gram-stain-negative, strictly aerobic, short-rod-shaped, and chemo-organoheterotrophic bacterium, designated KMU-50, was isolated from seawater gathered from Dadaepo Harbor in South Korea. The microorganism grew at 0-4.0% NaCl concentrations (w/v), pH 6.0-8.0, and 4-37 °C. The 16S rRNA gene sequence-based phylogenetic tree demonstrated that the strain KMU-50 is a novel member of the family Roseobacteraceae and were greatly related to Aliiroseovarius crassostreae CV919-312 with sequence similarity of 98.3%. C ω7c was the main fatty acid and ubiquinone-10 was the only isoprenoid quinone. The dominant polar lipids were phosphatidylglycerol, diphosphatidylglycerol, phosphatidylethanolamine, phosphatidylcholine, two unidentified phospholipids, an unidentified aminolipid, and an unidentified lipid. The genome size of strain KMU-50 was 3.60 Mbp with a DNA G+C content of 56.0%. The average nucleotide identity (ANI) and average amino acid identity (AAI) values between the genomes of strain KMU-50 and its closely related species were 76.0-81.2% and 62.2-81.5%, respectively. The digital DNA-DNA hybridization (dDDH) value of strain KMU-50 with the strain of A. crassostreae CV919-312 was 25.1%. The genome of the strain KMU-50 showed that it encoded many genes involved in the breakdown of bio-macromolecules, thus showing a high potential as a producer of industrially useful enzymes. Consequently, the strain is described as a new species in the genus Aliiroseovarius, for which the name Aliiroseovarius salicola sp. nov., is proposed with the type strain KMU-50 (= KCCM 90480 = NBRC 115482).
一种新型革兰氏阴性、严格需氧、短杆状、化能有机异养细菌,被命名为 KMU-50,从韩国大浦港采集的海水中分离得到。该微生物在 0-4.0%(w/v)NaCl 浓度、pH 值 6.0-8.0 和 4-37°C 的条件下生长。基于 16S rRNA 基因序列的系统发育树表明,菌株 KMU-50 是玫瑰杆菌科的一个新成员,与 Aliiroseovarius crassostreae CV919-312 的序列相似度为 98.3%。Cω7c 是主要的脂肪酸,泛醌-10 是唯一的异戊二烯醌。主要的极性脂类是磷脂酰甘油、双磷脂酰甘油、磷脂酰乙醇胺、磷脂酰胆碱、两种未鉴定的磷脂、一种未鉴定的胺脂和一种未鉴定的脂类。菌株 KMU-50 的基因组大小为 3.60 Mbp,G+C 含量为 56.0%。菌株 KMU-50 与其密切相关的种之间的平均核苷酸同一性(ANI)和平均氨基酸同一性(AAI)值分别为 76.0-81.2%和 62.2-81.5%。菌株 KMU-50 与 A. crassostreae CV919-312 菌株的数字 DNA-DNA 杂交(dDDH)值为 25.1%。该菌株的基因组显示,它编码了许多参与生物大分子分解的基因,因此具有作为工业有用酶的生产者的巨大潜力。因此,该菌株被描述为 Aliiroseovarius 属的一个新种,建议将其命名为 Aliiroseovarius salicola sp. nov.,其模式菌株为 KMU-50(=KCCM 90480=NRBC 115482)。