眼晶状体 γ-晶体蛋白中高半胱氨酸含量的功能意义。

The Functional Significance of High Cysteine Content in Eye Lens γ-Crystallins.

机构信息

Department of Physiology & Biophysics, Stony Brook University, SUNY, Stony Brook, NY 11794, USA.

Laufer Center for Physical & Quantitative Biology, Stony Brook University, SUNY, Stony Brook, NY 11794, USA.

出版信息

Biomolecules. 2024 May 17;14(5):594. doi: 10.3390/biom14050594.

Abstract

Cataract disease is strongly associated with progressively accumulating oxidative damage to the extremely long-lived crystallin proteins of the lens. Cysteine oxidation affects crystallin folding, interactions, and light-scattering aggregation especially strongly due to the formation of disulfide bridges. Minimizing crystallin aggregation is crucial for lifelong lens transparency, so one might expect the ubiquitous lens crystallin superfamilies (α and βγ) to contain little cysteine. Yet, the Cys content of γ-crystallins is well above the average for human proteins. We review literature relevant to this longstanding puzzle and take advantage of expanding genomic databases and improved machine learning tools for protein structure prediction to investigate it further. We observe remarkably low Cys conservation in the βγ-crystallin superfamily; however, in γ-crystallin, the spatial positioning of Cys residues is clearly fine-tuned by evolution. We propose that the requirements of long-term lens transparency and high lens optical power impose competing evolutionary pressures on lens βγ-crystallins, leading to distinct adaptations: high Cys content in γ-crystallins but low in βB-crystallins. Aquatic species need more powerful lenses than terrestrial ones, which explains the high methionine content of many fish γ- (and even β-) crystallins. Finally, we discuss synergies between sulfur-containing and aromatic residues in crystallins and suggest future experimental directions.

摘要

白内障疾病与晶状体中极其长寿的晶体蛋白逐渐积累的氧化损伤密切相关。由于形成二硫键,半胱氨酸的氧化特别强烈地影响晶体蛋白的折叠、相互作用和光散射聚集。最小化晶体蛋白聚集对于终生保持晶状体透明至关重要,因此人们可能期望无处不在的晶状体晶体蛋白超家族(α和βγ)含有很少的半胱氨酸。然而,γ-晶体蛋白的半胱氨酸含量远远高于人类蛋白质的平均水平。我们回顾了与这一长期存在的难题相关的文献,并利用不断扩大的基因组数据库和改进的机器学习工具进行蛋白质结构预测,对其进行了进一步研究。我们观察到βγ-晶体蛋白超家族中半胱氨酸的保守性显著降低;然而,在γ-晶体蛋白中,半胱氨酸残基的空间定位显然是由进化精确调整的。我们提出,长期的晶状体透明度和高晶状体光功率的要求对晶状体βγ-晶体蛋白施加了竞争的进化压力,导致了不同的适应:γ-晶体蛋白中的半胱氨酸含量高,而βB-晶体蛋白中的半胱氨酸含量低。水生物种比陆生物种需要更强大的晶状体,这解释了许多鱼类γ-(甚至β-)晶体蛋白中高蛋氨酸含量的原因。最后,我们讨论了晶体蛋白中含硫和芳香族残基之间的协同作用,并提出了未来的实验方向。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7468/11118217/296beb73ac8c/biomolecules-14-00594-g001.jpg

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