Laboratory of Environmental Virology, School of Architecture, Civil and Environmental Engineering, Ecole Polytechnique Fédérale de Lausanne (EPFL), Lausanne, Switzerland.
Laboratory of Atmospheric Processes and their Impacts, School of Architecture, Civil and Environmental Engineering, Ecole Polytechnique Fédérale de Lausanne (EPFL), Lausanne, Switzerland.
J Virol. 2024 Jul 23;98(7):e0040924. doi: 10.1128/jvi.00409-24. Epub 2024 Jun 13.
Aerosol transmission remains a major challenge for control of respiratory viruses, particularly those causing recurrent epidemics, like influenza A virus (IAV). These viruses are rarely expelled alone, but instead are embedded in a consortium of microorganisms that populate the respiratory tract. The impact of microbial communities and inter-pathogen interactions upon stability of transmitted viruses is well-characterized for enteric pathogens, but is under-studied in the respiratory niche. Here, we assessed whether the presence of five different species of commensal respiratory bacteria could influence the persistence of IAV within phosphate-buffered saline and artificial saliva droplets deposited on surfaces at typical indoor air humidity, and within airborne aerosol particles. In droplets, presence of individual species or a mixed bacterial community resulted in 10- to 100-fold more infectious IAV remaining after 1 h, due to bacterial-mediated flattening of drying droplets and early efflorescence. Even when no efflorescence occurred at high humidity or the bacteria-induced changes in droplet morphology were abolished by aerosolization instead of deposition on a well plate, the bacteria remained protective. and were the most stabilizing compared to other commensals at equivalent density, indicating the composition of an individual's respiratory microbiota is a previously unconsidered factor influencing expelled virus persistence.IMPORTANCEIt is known that respiratory infections such as coronavirus disease 2019 and influenza are transmitted by release of virus-containing aerosols and larger droplets by an infected host. The survival time of viruses expelled into the environment can vary depending on temperature, room air humidity, UV exposure, air composition, and suspending fluid. However, few studies consider the fact that respiratory viruses are not alone in the respiratory tract-we are constantly colonized by a plethora of bacteria in our noses, mouth, and lower respiratory system. In the gut, enteric viruses are known to be stabilized against inactivation and environmental decay by gut bacteria. Despite the presence of a similarly complex bacterial microbiota in the respiratory tract, few studies have investigated whether viral stabilization could occur in this niche. Here, we address this question by investigating influenza A virus stabilization by a range of commensal bacteria in systems representing respiratory aerosols and droplets.
气溶胶传播仍然是控制呼吸道病毒的主要挑战,特别是那些导致反复流行的病毒,如甲型流感病毒(IAV)。这些病毒很少单独排出,而是嵌入在存在于呼吸道中的微生物群落中。肠道病原体的微生物群落和病原体间相互作用对传播病毒稳定性的影响已经得到了很好的描述,但在呼吸道环境中研究较少。在这里,我们评估了五种不同的共生呼吸道细菌的存在是否会影响 IAV 在磷酸盐缓冲盐水和人工唾液滴中的稳定性,这些滴落在典型室内空气湿度下的表面上,并存在于空气传播的气溶胶颗粒中。在飞沫中,由于细菌介导的飞沫变平以及早期的反潮作用,单个物种或混合细菌群落的存在导致 1 小时后传染性 IAV 增加了 10 到 100 倍。即使在高湿度下没有发生反潮,或者通过气溶胶化而不是沉积在培养板上消除了细菌引起的液滴形态变化,细菌仍然具有保护作用。与其他共生菌相比,和在同等密度下的稳定性最高,这表明个体呼吸道微生物组的组成是一个以前未被考虑的影响呼出病毒持久性的因素。
重要性
众所周知,呼吸道感染,如 2019 年冠状病毒病和流感,是通过感染宿主释放含有病毒的气溶胶和较大飞沫传播的。释放到环境中的病毒的存活时间可能因温度、室内空气湿度、UV 暴露、空气成分和悬浮液而有所不同。然而,很少有研究考虑到这样一个事实,即呼吸道病毒并非孤立存在于呼吸道中——我们的鼻子、口腔和下呼吸道中不断存在大量细菌定植。在肠道中,肠道病毒被认为通过肠道细菌稳定,防止失活和环境衰变。尽管呼吸道中存在类似复杂的细菌微生物群,但很少有研究调查这种生态位中是否可能发生病毒稳定。在这里,我们通过在代表呼吸道气溶胶和飞沫的系统中调查一系列共生细菌对 IAV 的稳定作用来解决这个问题。