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一种利用基于外泌体的多基因生物标志物panel 区分肺癌原发肿瘤和远处肝转移的新算法。

A novel algorithm to differentiate between primary lung tumors and distant liver metastasis in lung cancers using an exosome based multi gene biomarker panel.

机构信息

Division of Biological and Life Science, Ahmedabad University, Ahmedabad, Gujarat, India.

Department of Life Science, School of Sciences, Gujarat University, Navrangpura, Ahmedabad, Gujarat, 380009, India.

出版信息

Sci Rep. 2024 Jun 14;14(1):13769. doi: 10.1038/s41598-024-63252-z.

DOI:10.1038/s41598-024-63252-z
PMID:38877052
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11178885/
Abstract

The lack of non-invasive methods for detection of early metastasis is a crucial reason for the poor prognosis of lung cancer (LC) liver metastasis (LM) patients. In this study, the goal was to identify circulating biomarkers based on a biomarker model for the early diagnosis and monitoring of patients with LCLM. An 8-gene panel identified in our previous study was validated in CTC, cfRNA and exosomes isolated from primary lung cancer with & without metastasis. Further multivariate analysis including PCA & ROC was performed to determine the sensitivity and specificity of the biomarker panel. Model validation cohort (n = 79) was used to verify the stability of the constructed predictive model. Further, clinic-pathological factors, survival analysis and immune infiltration correlations were also performed. In comparison to our previous tissue data, exosomes demonstrated a good discriminative value with an AUC of 0.7247, specificity (72.48%) and sensitivity (96.87%) for the 8-gene panel. Further individual gene patterns led us to a 5- gene panel that showed an AUC of 0.9488 (p =  < 0.001) and 0.9924 (p =  < 0.001) respectively for tissue and exosomes. Additionally, on validating the model in a larger cohort a risk score was obtained (RS > 0.2) for prediction of liver metastasis with an accuracy of 95%. Survival analysis and immune filtration markers suggested that four exosomal markers were independently associated with poor overall survival. We report a novel blood-based exosomal biomarker panel for early diagnosis, monitoring of therapeutic response, and prognostic evaluation of patients with LCLM.

摘要

缺乏用于检测早期转移的非侵入性方法是肺癌(LC)肝转移(LM)患者预后不良的关键原因。在这项研究中,我们的目标是基于生物标志物模型来识别循环生物标志物,用于早期诊断和监测具有 LCLM 的患者。我们之前的研究中确定的 8 个基因panel 在原发性肺癌(有或无转移)的 CTC、cfRNA 和外泌体中进行了验证。进一步进行了包括 PCA 和 ROC 的多变量分析,以确定生物标志物panel 的敏感性和特异性。模型验证队列(n=79)用于验证构建的预测模型的稳定性。此外,还进行了临床病理因素、生存分析和免疫浸润相关性分析。与我们之前的组织数据相比,外泌体显示出良好的区分价值,对于 8 个基因 panel,AUC 为 0.7247,特异性(72.48%)和敏感性(96.87%)。进一步的单个基因模式使我们得到了一个 5 个基因 panel,对于组织和外泌体,AUC 分别为 0.9488(p= < 0.001)和 0.9924(p= < 0.001)。此外,在更大的队列中验证模型时,获得了用于预测肝转移的风险评分(RS>0.2),准确率为 95%。生存分析和免疫过滤标志物表明,四个外泌体标志物与整体生存不良独立相关。我们报告了一种新的基于血液的外泌体生物标志物panel,用于早期诊断、监测治疗反应和评估具有 LCLM 的患者的预后。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e485/11178885/5cdb7518f30a/41598_2024_63252_Fig7_HTML.jpg
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https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e485/11178885/5cdb7518f30a/41598_2024_63252_Fig7_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e485/11178885/2984be430482/41598_2024_63252_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e485/11178885/00c5d2646aec/41598_2024_63252_Fig2_HTML.jpg
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