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使用牛津纳米孔长读长测序技术对Cc878菌株进行高质量的基因组组装和注释。

High-quality genome assembly and annotation of strain Cc878 using Oxford Nanopore long-read sequencing.

作者信息

Zhang Xin, Long Xinyuan, Xing Xiaoxing, Tai Jia, Wang Guanghui, Xu Ming, Liu Huiquan

机构信息

State Key Laboratory for Crop Stress Resistance and High-Efficiency Production, College of Plant Protection, Northwest A&F University, Yangling, Shaanxi, China.

出版信息

Microbiol Resour Announc. 2024 Jul 18;13(7):e0035724. doi: 10.1128/mra.00357-24. Epub 2024 Jun 20.

DOI:10.1128/mra.00357-24
PMID:38898546
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11256822/
Abstract

As a noteworthy biocontrol fungus, currently lacks a high-quality reference genome. Here, we present the first high-quality genome assembly of strain Cc878 achieved through Oxford Nanopore Long-Read sequencing. The nuclear genome of Cc878 was assembled into four contigs, totaling 59.38 Mb.

摘要

作为一种值得关注的生防真菌，目前缺乏高质量的参考基因组。在此，我们展示了通过牛津纳米孔长读长测序获得的菌株Cc878的首个高质量基因组组装。Cc878的核基因组被组装成4个重叠群，总计59.38 Mb。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/61e0/11256822/9b7a14266338/mra.00357-24.f001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/61e0/11256822/9b7a14266338/mra.00357-24.f001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/61e0/11256822/9b7a14266338/mra.00357-24.f001.jpg

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