Kim Jane H, Dong Julianna, Le Brandon H, Lonergan Zachery R, Gu Weifeng, Girke Thomas, Zhang Wei, Newman Dianne K, Martins-Green Manuela
Department of Molecular, Cell and Systems Biology, University of California, Riverside, CA 92521, USA.
Institute for Integrative Genome Biology, University of California, Riverside, CA 92521, USA.
Antioxidants (Basel). 2024 May 27;13(6):655. doi: 10.3390/antiox13060655.
() is an opportunistic pathogen frequently isolated from cutaneous chronic wounds. How , in the presence of oxidative stress (OS), colonizes chronic wounds and forms a biofilm is still unknown. The purpose of this study is to investigate the changes in gene expression seen when PA is challenged with the high levels of OS present in chronic wounds. We used a biofilm-forming strain isolated from the chronic wounds of our murine model (RPA) and performed a qPCR to obtain gene expression patterns as RPA developed a biofilm in vitro in the presence of high levels of OS, and then compared the findings in vivo, in our mouse model of chronic wounds. We found that the planktonic bacteria under OS conditions overexpressed quorum sensing genes that are important for the bacteria to communicate with each other, antioxidant stress genes important to reduce OS in the microenvironment for survival, biofilm formation genes and virulence genes. Additionally, we performed RNAseq in vivo and identified the activation of novel genes/pathways of the Type VI Secretion System (T6SS) involved in RPA pathogenicity. In conclusion, RPA appears to survive the high OS microenvironment in chronic wounds and colonizes these wounds by turning on virulence, biofilm-forming and survival genes. These findings reveal pathways that may be promising targets for new therapies aimed at disrupting -containing biofilms immediately after debridement to facilitate the treatment of chronic human wounds.
()是一种经常从皮肤慢性伤口中分离出来的机会致病菌。在氧化应激(OS)存在的情况下,它如何在慢性伤口中定殖并形成生物膜仍然未知。本研究的目的是调查当铜绿假单胞菌受到慢性伤口中高水平OS挑战时所观察到的基因表达变化。我们使用从我们的小鼠模型(RPA)的慢性伤口中分离出的一种形成生物膜的菌株,并进行了定量聚合酶链反应(qPCR)以获得基因表达模式,因为RPA在高水平OS存在的情况下在体外形成生物膜,然后在我们的慢性伤口小鼠模型中比较体内的研究结果。我们发现,在OS条件下的浮游细菌过表达了对细菌相互通讯很重要的群体感应基因、对在微环境中减少OS以利于生存很重要的抗氧化应激基因、生物膜形成基因和毒力基因。此外,我们在体内进行了RNA测序,并确定了参与RPA致病性的VI型分泌系统(T6SS)的新基因/途径的激活。总之,RPA似乎能在慢性伤口的高OS微环境中存活,并通过开启毒力、生物膜形成和生存基因在这些伤口中定殖。这些发现揭示了一些途径,可能是旨在清创后立即破坏含(该菌)生物膜以促进慢性人类伤口治疗的新疗法的有希望的靶点。