Fujian Provincial Key Laboratory of Soil Environmental Health and Regulation, College of Resources and Environment, Fujian Agriculture and Forestry University, Fuzhou, Fujian, 350002, P.R. China.
College of Ecology and Resource Engineering, Wuyi University, Wuyishan, Fujian, 354300, P.R. China.
Arch Microbiol. 2024 Jul 2;206(7):337. doi: 10.1007/s00203-024-04070-9.
Two Gram-staining-negative, facultative anaerobic, rod-shaped and phosphate-solubilizing strains designated SG2303 and SG2305, were isolated from paddy soil in China. Phylogenetic analysis based on 16 S rRNA gene sequences indicated that SG2303 and SG2305 represented a member of the genus Crenobacter within the family Neisseriaceae of the phylum Pseudomonadota. Strain SG2303 displayed higher 16 S rRNA gene sequence similarities with members of the genus Crenobacter ranging from 93.5 to 94.0%. Strains C. luteus YIM 78141 and C. cavernae K1W11S-77 were closest related to the isolated strains and were considered as type strains. Growth of strain SG2303 occurred at 10-55 °C (optimum 37 °C), pH 5.0-9.0 (optimum pH 6.0-7.0) and 0-1% (w/v) NaCl (optimum 0%). The average nucleotide identity (ANI) and digital DNA-DNA hybridization (dDDH) values between strain SG2303 and its closely related taxa were 76.1-78.2% and 20.5-22.1%, respectively. The genomic DNA G + C content was 62.2%. The quinone of strain SG2303 was Q-8. The major fatty acids (> 10%) of strain SG2303 were C (30.6%), summed feature 3 (Cω7c and/or Cω6c) (26.0%) and C 3OH (12.1%). The polar lipids were phosphatidylglycerol (PG), diphosphatidylglycerol (DPG), phosphatidylethanolamine (PE), phospholipids (PL), glycolipid (GL) and unidentified lipids (UL). Based on the results of the phylogenetic, physiological, biochemical, and morphological analysis, strain SG2303 is recognized as a novel species of the genus Crenobacter, for which the name Crenobacter oryzisoli sp. nov. is proposed. The type strain is SG2303 (= GDMCC 1.3970 = JCM 36468). In addition, SG2303 was also able of phosphorus solubilization and promoting the growth of rice seeds. Strain SG2303 exhibited a relatively high dissolvable phosphorus content of 2.52 µg·mL.
两株革兰氏阴性、兼性厌氧、杆状、溶磷的菌株 SG2303 和 SG2305,从中国稻田土壤中分离得到。基于 16S rRNA 基因序列的系统发育分析表明,SG2303 和 SG2305 代表 Neisseriaceae 家族 Pseudomonadota 属的一个成员。菌株 SG2303 与 Crenobacter 属的成员具有较高的 16S rRNA 基因序列相似性,范围为 93.5%至 94.0%。C. luteus YIM 78141 和 C. cavernae K1W11S-77 菌株与分离株最为密切相关,被视为模式株。菌株 SG2303 的生长温度为 10-55°C(最适 37°C),pH 值为 5.0-9.0(最适 pH 值为 6.0-7.0),盐度为 0-1%(w/v)(最适 0%)。菌株 SG2303 与其密切相关分类群之间的平均核苷酸同一性(ANI)和数字 DNA-DNA 杂交(dDDH)值分别为 76.1-78.2%和 20.5-22.1%。基因组 DNA G+C 含量为 62.2%。菌株 SG2303 的醌为 Q-8。菌株 SG2303 的主要脂肪酸(>10%)为 C(30.6%)、总和特征 3(Cω7c 和/或 Cω6c)(26.0%)和 C3OH(12.1%)。极性脂为磷脂酰甘油(PG)、双磷脂酰甘油(DPG)、磷脂酰乙醇胺(PE)、磷脂(PL)、糖脂(GL)和未鉴定的脂(UL)。基于系统发育、生理、生化和形态分析的结果,菌株 SG2303 被认定为 Crenobacter 属的一个新种,命名为 Crenobacter oryzisoli sp. nov.。模式株为 SG2303(=GDMCC 1.3970=JCM 36468)。此外,SG2303 还具有溶磷和促进水稻种子生长的能力。菌株 SG2303 具有相对较高的可溶性磷含量,为 2.52μg·mL-1。