Department of Chemistry and Biochemistry, University of Delaware, Newark, Delaware 19716, United States.
Department of Structural Biology, University of Pittsburgh School of Medicine, 3501 Fifth Ave., Pittsburgh, Pennsylvania 15261, United States.
Biochemistry. 2024 Sep 3;63(17):2207-2216. doi: 10.1021/acs.biochem.4c00232. Epub 2024 Jul 15.
Structural characterization of protein-ligand binding interfaces at atomic resolution is essential for improving the design of specific and potent inhibitors. Herein, we explored fast F- and H-detected magic angle spinning NMR spectroscopy to investigate the interaction between two fluorinated ligand diastereomers with the microcrystalline galectin-3 carbohydrate recognition domain. The detailed environment around the fluorine atoms was mapped by 2D C-F and H-F dipolar correlation experiments and permitted characterization of the binding interface. Our results demonstrate that F MAS NMR is a powerful tool for detailed characterization of protein-ligand interfaces and protein interactions at the atomic level.
在原子分辨率下对蛋白质-配体结合界面进行结构表征对于提高特异性和强效抑制剂的设计至关重要。在此,我们探索了快速 F 和 H 检测魔角旋转 NMR 光谱法,以研究两种氟化配体非对映异构体与微晶半乳糖凝集素-3 碳水化合物识别结构域之间的相互作用。通过二维 C-F 和 H-F 偶极相关实验绘制了氟原子周围的详细环境图,并允许对结合界面进行特征描述。我们的结果表明,F MAS NMR 是一种用于在原子水平上详细表征蛋白质-配体界面和蛋白质相互作用的强大工具。