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结直肠癌候选生物标志物的鉴定及复发的预后分析。

Identification of candidate biomarkers and prognostic analysis of recurrence in colorectal cancer.

机构信息

The Colorectal and Anal Surgery Department, Shanxi Provincial People's Hospital, Shanxi Medical University, Taiyuan, China.

Key Laboratory of Interface Science and Engineering in Advanced Materials, Ministry of Education, Taiyuan University of Technology, Taiyuan, China.

出版信息

Cancer Biomark. 2024;40(3-4):251-262. doi: 10.3233/CBM-230390.

Abstract

Colorectal cancer (CRC) is one of the most common digestive tract malignant tumors, which has a high mortality rate especially for patients with CRC recurrence. However, the pathological mechanism of recurrence of CRC is unclear. In this study, we integrated multiple cohort datasets and databases to clarify and verify potential key candidate biomarkers and signal transduction pathways in recurrence of CRC. As results, 628 DEGs were identified from GSE33113 and GSE2630 datasets and their function and pathway were analyzed. 14 hub genes related to CRC recurrence were screened from and their influence on survival were analyzed. Two key genes (IL1B and DDAH1) regarded as prognostic factors were further screened. Relapse-free survival results indicated the interaction between IL1B and DDAH1 genes and B cells was the most obvious and correlated with survival, with statistical significance (P< 0.05). Specially, cox regression analysis suggested that patients with T1 and N0 stages had a higher risk of recurrence than patients with T2 and N1. This work would provide potential value for prognosis, and would promote molecular targeting therapy for CRC recurrence.

摘要

结直肠癌(CRC)是最常见的消化道恶性肿瘤之一,其死亡率尤其高,尤其是对于 CRC 复发的患者。然而,CRC 复发的病理机制尚不清楚。在这项研究中,我们整合了多个队列数据集和数据库,以阐明和验证 CRC 复发的潜在关键候选生物标志物和信号转导途径。结果,从 GSE33113 和 GSE2630 数据集鉴定出 628 个差异表达基因,并分析其功能和途径。从数据库中筛选出与 CRC 复发相关的 14 个关键基因,并分析其对生存的影响。进一步筛选出两个关键基因(IL1B 和 DDAH1)作为预后因素。无复发生存结果表明,IL1B 和 DDAH1 基因与 B 细胞之间的相互作用最明显,与生存相关,具有统计学意义(P<0.05)。特别是,Cox 回归分析表明,T1 和 N0 期患者比 T2 和 N1 期患者有更高的复发风险。这项工作将为预后提供潜在价值,并将促进 CRC 复发的分子靶向治疗。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d468/11380219/c945cfc10ee8/cbm-40-cbm230390-g001.jpg

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