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定向进化和机器学习在提高用于合成二氢丁苯那嗪的酮还原酶非对映选择性中的应用。

Application of Directed Evolution and Machine Learning to Enhance the Diastereoselectivity of Ketoreductase for Dihydrotetrabenazine Synthesis.

作者信息

Huang Chenming, Zhang Li, Tang Tong, Wang Haijiao, Jiang Yingqian, Ren Hanwen, Zhang Yitian, Fang Jiali, Zhang Wenhe, Jia Xian, You Song, Qin Bin

机构信息

Wuya College of Innovation, Shenyang Pharmaceutical University, 103 Wenhua Road, Shenhe, Shenyang 110016, People's Republic of China.

School of Life Sciences and Biopharmaceutical Sciences, Shenyang Pharmaceutical University, 103 Wenhua Road, Shenhe, Shenyang 110016, People's Republic of China.

出版信息

JACS Au. 2024 Jun 26;4(7):2547-2556. doi: 10.1021/jacsau.4c00284. eCollection 2024 Jul 22.

Abstract

Biocatalysis is an effective approach for producing chiral drug intermediates that are often difficult to synthesize using traditional chemical methods. A time-efficient strategy is required to accelerate the directed evolution process to achieve the desired enzyme function. In this research, we evaluated machine learning-assisted directed evolution as a potential approach for enzyme engineering, using a moderately diastereoselective ketoreductase library as a model system. Machine learning-assisted directed evolution and traditional directed evolution methods were compared for reducing (±)-tetrabenazine to dihydrotetrabenazine via kinetic resolution facilitated by BsSDR10, a short-chain dehydrogenase/reductase from . Both methods successfully identified variants with significantly improved diastereoselectivity for each isomer of dihydrotetrabenazine. Furthermore, the preparation of (2,3,11b)-dihydrotetrabenazine has been successfully scaled up, with an isolated yield of 40.7% and a diastereoselectivity of 91.3%.

摘要

生物催化是生产手性药物中间体的有效方法,这些中间体通常难以用传统化学方法合成。需要一种省时的策略来加速定向进化过程,以实现所需的酶功能。在本研究中,我们评估了机器学习辅助的定向进化作为一种潜在的酶工程方法,使用适度非对映选择性酮还原酶文库作为模型系统。比较了机器学习辅助的定向进化和传统定向进化方法,通过来自嗜热栖热菌的短链脱氢酶/还原酶BsSDR10促进的动力学拆分,将(±)-丁苯那嗪还原为二氢丁苯那嗪。两种方法都成功鉴定出对二氢丁苯那嗪的每种异构体具有显著提高的非对映选择性的变体。此外,(2,3,11b)-二氢丁苯那嗪的制备已成功放大,分离产率为40.7%,非对映选择性为91.3%。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3b49/11267543/a724b00e4971/au4c00284_0001.jpg

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