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濒危咖啡属植物(胡克氏)德布与J.拉希里的完整叶绿体基因组序列

The complete chloroplast genome sequence of (Hook.f.) Deb & J.Lahiri, an endangered coffeeae plant.

作者信息

Chen Wenshuai, Zhao Guanfei, Lei Ming, Zhu Rongjie

机构信息

Tibet Plateau Institute of Biology, Xizang, China.

Institute of Vegetable Sciences, Tibet Academy of Agricultural and Animal Husbandry Sciences, Xizang, China.

出版信息

Mitochondrial DNA B Resour. 2024 Jul 23;9(7):907-910. doi: 10.1080/23802359.2024.2342936. eCollection 2024.

DOI:10.1080/23802359.2024.2342936
PMID:39055530
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11271133/
Abstract

(Hook.f.) Deb & J.Lahiri, a member of the family, is an endangered wild plant species with potential economic value. In this research, the complete chloroplast genome of was sequenced to gain insight into its genome feature and better understand the phylogenetic relationships among the species. The chloroplast genome, with a total length of 155,036 bp, comprises two inverted repeats (IR) regions spanning 25,692 bp each, a large single-copy (LSC) region measuring 85,437 bp, and a short single-copy (SSC) region measuring 18,215 bp. There is an overall 37% GC content in the chloroplast genome. By annotation analysis,. 54 tRNA genes, 10 rRNA genes, and 107 protein-coding genes were all annotated in Furthermore, we applied phylogenetic analysis that revealed a close relationship between , and , placing them together within the family.

摘要

(胡克氏)德布和J.拉希里,该科的一个成员,是一种具有潜在经济价值的濒危野生植物物种。在本研究中,对其完整叶绿体基因组进行了测序,以深入了解其基因组特征,并更好地理解该物种之间的系统发育关系。叶绿体基因组全长155,036 bp,由两个各长25,692 bp的反向重复(IR)区域、一个长85,437 bp的大单拷贝(LSC)区域和一个长18,215 bp的短单拷贝(SSC)区域组成。叶绿体基因组的总体GC含量为37%。通过注释分析,共注释了54个tRNA基因、10个rRNA基因和107个蛋白质编码基因。此外,我们进行了系统发育分析,结果表明它与……、……关系密切,将它们共同置于该科内。

需注意,原文中存在一些未明确的指代内容(如“(胡克氏)德布和J.拉希里”中的“胡克氏”未明确具体所指,以及文中多次出现的“……”部分),可能会影响译文的完整性和准确性,但按照要求严格进行了翻译。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fed2/11271133/284c74b7c6a9/TMDN_A_2342936_F0003_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fed2/11271133/ffed75e03394/TMDN_A_2342936_F0001_C.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fed2/11271133/091828f9a337/TMDN_A_2342936_F0002_C.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fed2/11271133/284c74b7c6a9/TMDN_A_2342936_F0003_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fed2/11271133/ffed75e03394/TMDN_A_2342936_F0001_C.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fed2/11271133/091828f9a337/TMDN_A_2342936_F0002_C.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fed2/11271133/284c74b7c6a9/TMDN_A_2342936_F0003_B.jpg

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