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全基因组范围内对[具体物种名称未给出]中基因的鉴定与表达分析揭示了它们在非生物胁迫耐受性中的潜在作用。

Genome-Wide Identification and Expression Analysis of Genes in Reveals Their Potential Roles in Abiotic Stress Tolerance.

作者信息

Ji Zhaojing, Wang Ruolan, Zhang Meiqi, Chen Luhan, Wang Yuexin, Hui Jiyun, Hao Shiya, Lv Bingcan, Jiang Qiwei, Cao Yunyun

机构信息

College of Horticulture Science and Engineering, Shandong Agricultural University, Tai'an 271018, China.

出版信息

Curr Issues Mol Biol. 2024 Jun 28;46(7):6646-6664. doi: 10.3390/cimb46070396.

DOI:10.3390/cimb46070396
PMID:39057038
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11275500/
Abstract

The bile acid sodium symporter (BASS) family plays an important role in transporting substances and coordinating plants' salt tolerance. However, the function of in has not yet been elucidated. In this study, eight genes distributed on five chromosomes were identified that belonged to four subfamilies. Expression profile analysis showed that was highly expressed in roots, whereas was highly expressed in flowers. The promoter element analysis also identified several typical homeopathic elements involved in abiotic stress tolerance and stress-related hormonal responses. Notably, under salt stress, the expression of was significantly upregulated; under osmotic stress, that of increased and then decreased; and under cold stress, that of generally declined. The protein-protein interaction analysis revealed that the homologous gene interacted with Nhd1 (N-mediated heading date-1) to alleviate salt stress in plants, while the homologous gene interacted with BLOS1 (biogenesis of lysosome-related organelles complex 1 subunit 1) via co-regulation with SNX1 (sorting nexin 1) to mitigate an unfavorable growing environment for roots. Further, Bra-miR396 (Bra-microRNA396) targeting and played a role in the plant response to osmotic and cold stress conditions, respectively. This research demonstrates that , and harbor great potential for regulating abiotic stresses. The findings will help advance the study of the functions of the gene family.

摘要

胆汁酸钠共转运体(BASS)家族在物质运输和协调植物耐盐性方面发挥着重要作用。然而,其中[具体基因名称]的功能尚未阐明。在本研究中,鉴定出分布在五条染色体上的八个[具体基因名称]基因,它们属于四个亚家族。表达谱分析表明,[具体基因名称1]在根中高度表达,而[具体基因名称2]在花中高度表达。启动子元件分析还鉴定出了几个参与非生物胁迫耐受性和胁迫相关激素反应的典型顺势作用元件。值得注意的是,在盐胁迫下,[具体基因名称3]的表达显著上调;在渗透胁迫下,[具体基因名称4]的表达先增加后降低;在冷胁迫下,[具体基因名称5]的表达总体下降。蛋白质-蛋白质相互作用分析表明,[具体基因名称6]的同源基因与Nhd1(N介导的抽穗期-1)相互作用以减轻植物的盐胁迫,而[具体基因名称7]的同源基因通过与SNX1(分选连接蛋白1)共同调控与BLOS1(溶酶体相关细胞器复合体1亚基1的生物发生)相互作用,以缓解根系生长的不利环境。此外,靶向[具体基因名称8]和[具体基因名称9]的Bra-miR396(Bra-微小RNA396)分别在植物对渗透胁迫和冷胁迫条件的响应中发挥作用。本研究表明,[具体基因名称8]、[具体基因名称9]和[具体基因名称10]在调节非生物胁迫方面具有巨大潜力。这些发现将有助于推进[具体基因名称]基因家族功能的研究。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fb58/11275500/3625562a457e/cimb-46-00396-g010.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fb58/11275500/3b72c9cb7e98/cimb-46-00396-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fb58/11275500/a5cf40be5fa5/cimb-46-00396-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fb58/11275500/f0015617fb0b/cimb-46-00396-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fb58/11275500/8d91396ddeb0/cimb-46-00396-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fb58/11275500/7355837611e6/cimb-46-00396-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fb58/11275500/222073eb7abc/cimb-46-00396-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fb58/11275500/f7e1c0579829/cimb-46-00396-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fb58/11275500/8925938a9452/cimb-46-00396-g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fb58/11275500/3930c7d05477/cimb-46-00396-g009.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fb58/11275500/3625562a457e/cimb-46-00396-g010.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fb58/11275500/3b72c9cb7e98/cimb-46-00396-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fb58/11275500/a5cf40be5fa5/cimb-46-00396-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fb58/11275500/f0015617fb0b/cimb-46-00396-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fb58/11275500/8d91396ddeb0/cimb-46-00396-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fb58/11275500/7355837611e6/cimb-46-00396-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fb58/11275500/222073eb7abc/cimb-46-00396-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fb58/11275500/f7e1c0579829/cimb-46-00396-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fb58/11275500/8925938a9452/cimb-46-00396-g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fb58/11275500/3930c7d05477/cimb-46-00396-g009.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fb58/11275500/3625562a457e/cimb-46-00396-g010.jpg

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