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感染耐萘啶酸的大肠杆菌噬菌体KIT06的分离、特性鉴定及全基因组序列

Isolation, Characterization, and Complete Genome Sequence of Escherichia Phage KIT06 Which Infects Nalidixic Acid-Resistant .

作者信息

Han Nguyen Song, Harada Mana, Pham-Khanh Nguyen Huan, Kamei Kaeko

机构信息

Department of Functional Chemistry, Kyoto Institute of Technology, Kyoto 606-8585, Japan.

Department of Biology, College of Natural Sciences, Can Tho University, Can Tho City 900000, Vietnam.

出版信息

Antibiotics (Basel). 2024 Jun 23;13(7):581. doi: 10.3390/antibiotics13070581.

Abstract

() is one of the most common sources of infection in humans and animals. The emergence of which acquires resistance to various antibiotics has made treatment difficult. Bacteriophages can be considered promising agents to expand the options for the treatment of antibiotic-resistant bacteria. This study describes the isolation and characterization of phage KIT06, which can infect resistant to the quinolone antibiotic nalidixic acid. Phage virions possess an icosahedral head that is 93 ± 8 nm in diameter and a contractile tail (116 ± 12 nm × 13 ± 5 nm). The phage was found to be stable under various thermal and pH conditions. A one-step growth curve showed that the latent time of the phage was 20 min, with a burst size of 28 particles per infected cell. Phage KIT06 infected 7 of 12 strains. It inhibited the growth of the host bacterium and nalidixic acid-resistant . The lipopolysaccharide and outer membrane proteins of , and , are phage receptors. Phage KIT06 is a new species of the genus with a genome of 167,059 bp consisting of 264 open reading frames (ORFs) that encode gene products related to morphogenesis, replication, regulation, and host lysis. The lack of genes encoding integrase or excisionase indicated that this phage was lytic. Thus, KIT06 could potentially be used to treat antibiotic-resistant using phage therapy. However, further studies are essential to understand its use in combination with other antimicrobial agents and its safe use in such applications.

摘要

(某细菌)是人类和动物中最常见的感染源之一。该细菌对多种抗生素产生耐药性,这使得治疗变得困难。噬菌体可被视为有前景的药物,以扩大治疗耐抗生素细菌的选择范围。本研究描述了噬菌体KIT06的分离和特性,该噬菌体可感染对喹诺酮抗生素萘啶酸耐药的(某细菌)。噬菌体病毒粒子具有直径为93±8nm的二十面体头部和收缩尾(116±12nm×13±5nm)。发现该噬菌体在各种温度和pH条件下都很稳定。一步生长曲线表明,噬菌体的潜伏期为20分钟,每个感染细胞的爆发量为28个粒子。噬菌体KIT06感染了12株(某细菌)菌株中的7株。它抑制宿主细菌和耐萘啶酸的(某细菌)的生长。(某细菌)、(另一细菌)和(又一细菌)的脂多糖和外膜蛋白是噬菌体受体。噬菌体KIT06是(某属)的一个新物种,其基因组为167,059bp,由264个开放阅读框(ORF)组成,这些开放阅读框编码与形态发生、复制、调控和宿主裂解相关的基因产物。缺乏编码整合酶或切除酶的基因表明该噬菌体是裂解性的。因此,KIT06有可能用于通过噬菌体疗法治疗耐抗生素的(某细菌)。然而,进一步的研究对于了解其与其他抗菌剂联合使用的情况以及在这些应用中的安全使用至关重要。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8b72/11274021/ee2cfb7efa71/antibiotics-13-00581-g001.jpg

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