Zhou Yan, Bao Hongduo, Zhang Hui, Wang Ran
Key Lab of Agro-Food Safety and Quality Ministry of Agriculture, and Key Lab of Animal-Derived Food Safety of Jiangsu Province, Jiangsu Academy of Agricultural Sciences, Nanjing, China.
Intervirology. 2015;58(4):218-31. doi: 10.1159/000437426. Epub 2015 Aug 26.
To characterize the lytic coliphage vB_EcoM_JS09 (phage JS09) isolated from sewage samples of a swine farm in Jiangsu Province, China, which infects antibiotic-resistant avian pathogenic Escherichia coli (APEC) and enterotoxigenic E. coli (ETEC).
Transmission electron microscopy revealed that phage JS09 has an isometric icosahedral head (76 nm in diameter) and a long contractile tail (140 nm in length) and features a T-even morphology. Its latent period was 30 min and the average burst size was 79 phage particles per infected cell. It attached to the host cells within 9 min. JS09 could infect 16 clinically isolated APEC and ETEC strains and the laboratory-engineered E. coli K and B strains. Ten of the clinical isolates of E. coli were resistant to antibiotics. At a multiplicity of infection of 10, 3, 1, or 0.3, the phage caused rapid cell lysis within 2 h, resulting in 5- to 10-fold reductions in cell concentration. Sequencing of the JS09 genome revealed a 169.148-kb linear but circularly permuted and terminally redundant dsDNA with 37.98% G+C content. Two hundred seventy-three open reading frames were predicted to be coding sequences, 135 of which were functionally defined and organized in a modular format which includes modules for DNA replication, DNA packaging, structural proteins, and host cell lysis proteins. Phage JS09 is assigned to the Caudovirales order (Myoviridae phage family), and it is considered a T4-like phage based on its morphological, genomic, and growth characteristics. JS09 gp37, a receptor-binding protein (RBP) important for host cell infection, shares little homology with other RBP in the NCBI database, which suggests that the variable regions in gp37 determine the unique host range of phage JS09. Protein sequence comparisons cluster the putative 'RBP' of JS09 much more closely with those of Yersinia phage phiD1, phage TuIa, and phage TuIb.
A novel lytic coliphage named JS09 was isolated from sewage samples of a swine farm in Jiangsu Province, China. It could infect antibiotic-resistant APEC and ETEC. The morphological, genomic, and growth characteristics of JS09 were studied, and this will be helpful for phage therapy in controlling diseases caused by APEC and ETEC.
对从中国江苏省某养猪场污水样本中分离出的裂解性大肠杆菌噬菌体vB_EcoM_JS09(噬菌体JS09)进行特性分析,该噬菌体可感染耐抗生素的禽致病性大肠杆菌(APEC)和产肠毒素大肠杆菌(ETEC)。
透射电子显微镜显示,噬菌体JS09具有等轴二十面体头部(直径76 nm)和长收缩尾(长度140 nm),具有T偶数形态。其潜伏期为30分钟,平均裂解量为每个感染细胞产生79个噬菌体颗粒。它在9分钟内附着于宿主细胞。JS09可感染16株临床分离的APEC和ETEC菌株以及实验室构建的大肠杆菌K和B菌株。其中10株大肠杆菌临床分离株对抗生素耐药。在感染复数为10、3、1或0.3时,该噬菌体在2小时内导致细胞快速裂解,使细胞浓度降低5至10倍。对JS09基因组进行测序,发现其为一条169.148 kb的线性双链DNA,呈环状排列且末端冗余,G+C含量为37.98%。预测有273个开放阅读框为编码序列,其中135个功能已明确,且以模块化形式组织,包括DNA复制、DNA包装、结构蛋白和宿主细胞裂解蛋白模块。噬菌体JS09被归类为有尾噬菌体目(肌尾噬菌体科),基于其形态、基因组和生长特性,被认为是一种T4样噬菌体。JS09 gp37是一种对宿主细胞感染很重要的受体结合蛋白(RBP),与NCBI数据库中的其他RBP几乎没有同源性,这表明gp37中的可变区决定了噬菌体JS09独特的宿主范围。蛋白质序列比较将JS09的假定“RBP”与耶尔森菌噬菌体phiD1、噬菌体TuIa和噬菌体TuIb的“RBP”聚类得更紧密。
从中国江苏省某养猪场污水样本中分离出一种新型裂解性大肠杆菌噬菌体JS09。它可感染耐抗生素的APEC和ETEC。对JS09的形态、基因组和生长特性进行了研究,这将有助于噬菌体疗法控制由APEC和ETEC引起的疾病。