Sanchez-Gallardo Rocio, Bottacini Francesca, Friess Lisa, Esteban-Torres Maria, Somers Clarissa, Moore Rebecca L, McAuliffe Fionnuala M, Cotter Paul D, van Sinderen Douwe
APC Microbiome Ireland, University College Cork, Cork, Ireland.
School of Microbiology, University College Cork, Cork, Ireland.
Front Microbiol. 2024 Jul 16;15:1414471. doi: 10.3389/fmicb.2024.1414471. eCollection 2024.
Bifidobacteria are commonly encountered members of the human gut microbiota that possess the enzymatic machinery necessary for the metabolism of certain plant-derived, complex carbohydrates. In the current study we describe differential growth profiles elicited by a panel of 21 newly isolated strains on various plant-derived glycans. Using a combination of gene-trait matching and comparative genome analysis, we identified two distinct xylanases responsible for the degradation of xylan. Furthermore, three distinct extracellular α-amylases were shown to be involved in starch degradation by certain strains of . Biochemical characterization showed that all three α-amylases can cleave the related substrates amylose, amylopectin, maltodextrin, glycogen and starch. The genes encoding these enzymes are variably found in the species , therefore constituting a strain-specific adaptation to the gut environment as these glycans constitute common plant-derived carbohydrates present in the human diet. Overall, our study provides insights into the metabolism of these common dietary carbohydrates by a human-derived bifidobacterial species.
双歧杆菌是人类肠道微生物群中常见的成员,它们拥有代谢某些植物来源的复杂碳水化合物所需的酶机制。在本研究中,我们描述了一组21株新分离菌株在各种植物来源聚糖上引发的不同生长曲线。通过基因特征匹配和比较基因组分析相结合的方法,我们鉴定出两种负责木聚糖降解的不同木聚糖酶。此外,三种不同的细胞外α-淀粉酶被证明参与了某些双歧杆菌菌株对淀粉的降解。生化特性表明,所有三种α-淀粉酶都能切割相关底物直链淀粉、支链淀粉、麦芽糊精、糖原和淀粉。编码这些酶的基因在双歧杆菌物种中分布各异,因此构成了对肠道环境的菌株特异性适应,因为这些聚糖是人类饮食中常见的植物来源碳水化合物。总体而言,我们的研究为一种源自人类的双歧杆菌物种对这些常见膳食碳水化合物的代谢提供了见解。