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免疫炎症因子与糖尿病肾病相关:来自 NHANES 2013-2018 和 GEO 数据库的证据。

The immune-inflammation factor is associated with diabetic nephropathy: evidence from NHANES 2013-2018 and GEO database.

机构信息

Nephrology department, General Hospital of Ningxia Medical University, No.804 Shengli South Street, Xingqing District, Yinchuan, 750000, Ningxia, China.

Department of Thyroid Surgery, The First Affiliated Hospital of Kunming Medical University, Kunming, 650032, Yunnan, China.

出版信息

Sci Rep. 2024 Aug 1;14(1):17760. doi: 10.1038/s41598-024-68347-1.

Abstract

Diabetic nephropathy (DN) is a common secondary kidney disease. Immune and inflammatory responses play an influential role in the development of DN. This study aims to explore the role and mechanisms of immune- and inflammatory-related factors in DN. Participants from the NHANES 2013-2018 were included to evaluate the association between the SII and DN. Considering the skewed distribution of SII, log SII was used for subsequent analysis. Then, the DEGs were extracted from the GSE96804 dataset by the "limma" package of R, which were further screened out genes in the key module based on WGCNA. The intersection genes between DEGs and key module genes were the key genes for the following mechanism exploration. The CyTargetlinker plug-in of Cytoscape software was used to construct the drug-genes network. Molecular docking was used to calculate the binding affinity between potential drugs and the hub genes. Among the 8236 participants from NHANES 2013-2018, Log SII was significantly associated with DN (p < 0.05). DEG and WGCNA revealed 30 DN-related genes, which mainly regulated immune- and inflammation pathways, and the NOD-like receptor signaling pathway was the core pathway highly involved in the DN occurrence. Moreover, NAIP, ZFP36, and DUSP1 were identified as hub genes in DN progression and there was a strong binding interaction between resveratrol and DUSP1.In conclusion, immune inflammation plays an influential role in the occurrence and development of DN. SII is an effective diagnostic marker for DN and resveratrol might have potential value in treating DN.

摘要

糖尿病肾病(DN)是一种常见的继发性肾脏疾病。免疫和炎症反应在 DN 的发生发展中起着重要作用。本研究旨在探讨免疫和炎症相关因素在 DN 中的作用和机制。本研究纳入了来自 NHANES 2013-2018 年的数据,以评估 SII 与 DN 之间的相关性。考虑到 SII 的偏态分布,使用 log SII 进行后续分析。然后,使用 R 中的“limma”包从 GSE96804 数据集提取 DEGs,根据 WGCNA 进一步筛选关键模块中的基因。DEGs 和关键模块基因之间的交集基因是后续机制探索的关键基因。使用 Cytoscape 软件的 CyTargetlinker 插件构建药物-基因网络。使用分子对接计算潜在药物与枢纽基因之间的结合亲和力。在来自 NHANES 2013-2018 年的 8236 名参与者中,Log SII 与 DN 显著相关(p<0.05)。DEG 和 WGCNA 揭示了 30 个与 DN 相关的基因,这些基因主要调节免疫和炎症途径,而 NOD 样受体信号通路是高度参与 DN 发生的核心途径。此外,NAIP、ZFP36 和 DUSP1 被确定为 DN 进展中的枢纽基因,白藜芦醇和 DUSP1 之间存在强烈的结合相互作用。总之,免疫炎症在 DN 的发生发展中起着重要作用。SII 是诊断 DN 的有效标志物,白藜芦醇可能在治疗 DN 方面具有潜在价值。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b042/11291652/0658bc8bc901/41598_2024_68347_Fig1_HTML.jpg

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