Small Biosystems Lab, Condensed Matter Physics Department, Universitat de Barcelona, Barcelona 08028, Spain.
Institut de Nanociència i Nanotecnologia, Universitat de Barcelona, Barcelona 08028, Spain.
Proc Natl Acad Sci U S A. 2024 Aug 20;121(34):e2408313121. doi: 10.1073/pnas.2408313121. Epub 2024 Aug 16.
RNA's diversity of structures and functions impacts all life forms since primordia. We use calorimetric force spectroscopy to investigate RNA folding landscapes in previously unexplored low-temperature conditions. We find that Watson-Crick RNA hairpins, the most basic secondary structure elements, undergo a glass-like transition below [Formula: see text]C where the heat capacity abruptly changes and the RNA folds into a diversity of misfolded structures. We hypothesize that an altered RNA biochemistry, determined by sequence-independent ribose-water interactions, outweighs sequence-dependent base pairing. The ubiquitous ribose-water interactions lead to universal RNA phase transitions below , such as maximum stability at [Formula: see text]C where water density is maximum, and cold denaturation at [Formula: see text]C. RNA cold biochemistry may have a profound impact on RNA function and evolution.
RNA 的结构和功能多样性从原始生命形式开始就影响着所有生命形式。我们使用量热力谱技术在以前未探索的低温条件下研究 RNA 折叠景观。我们发现,沃森-克里克 RNA 发夹,最基本的二级结构元件,在 [Formula: see text]C 以下会发生玻璃态转变,此时热容突然发生变化,RNA 折叠成多种错误折叠的结构。我们假设,由序列无关的核糖-水相互作用决定的改变的 RNA 生物化学,超过了序列依赖的碱基配对。普遍存在的核糖-水相互作用导致了普遍的 RNA 相转变,例如在 [Formula: see text]C 时最大稳定性,此时水密度最大,以及在 [Formula: see text]C 时的冷变性。RNA 低温生物化学可能对 RNA 功能和进化产生深远影响。