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真菌生物防治剂科斯的基因组序列草图

Draft genome sequence of the fungal biocontrol agent, Kos.

作者信息

Clarke Joy, Kosanovic Dejana, Kavanagh Kevin, Grogan Helen, Fitzpatrick David A

机构信息

Department of Biology, Maynooth University, Maynooth, Ireland.

Horticulture Development Department, Teagasc, Dublin, Ireland.

出版信息

Microbiol Resour Announc. 2024 Oct 10;13(10):e0057524. doi: 10.1128/mra.00575-24. Epub 2024 Aug 27.

DOI:10.1128/mra.00575-24
PMID:39189725
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11465862/
Abstract

Here, we report the draft genome sequence of strain Kos, isolated from casing soil used during cultivation in Dublin, Ireland. Kos exhibits a suppressive ability toward , , and , which are common threats to production, cultivation, and quality.

摘要

在此,我们报告了从爱尔兰都柏林栽培过程中使用的覆土中分离出的科斯菌株的基因组序列草图。科斯菌株对生产、栽培和品质构成常见威胁的[具体威胁对象未明确写出]、[具体威胁对象未明确写出]和[具体威胁对象未明确写出]具有抑制能力。

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本文引用的文献

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Curr Microbiol. 2023 Sep 22;80(11):354. doi: 10.1007/s00284-023-03423-9.
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antiSMASH 7.0: new and improved predictions for detection, regulation, chemical structures and visualisation.antiSMASH 7.0:用于检测、调控、化学结构和可视化的全新且改进的预测功能。
Nucleic Acids Res. 2023 Jul 5;51(W1):W46-W50. doi: 10.1093/nar/gkad344.
3
Characterising the proteomic response of mushroom pathogen to QST 713 and Kos biocontrol agents.表征蘑菇病原菌对QST 713和科斯生物防治剂的蛋白质组学反应。
Eur J Plant Pathol. 2022;163(2):369-379. doi: 10.1007/s10658-022-02482-1. Epub 2022 Apr 22.
4
Analysis of the effect of Bacillus velezensis culture filtrate on the growth and proteome of Cladobotryum mycophilum.分析韦氏芽孢杆菌培养滤液对珊瑚菌生长和蛋白质组的影响。
Fungal Biol. 2022 Jan;126(1):11-19. doi: 10.1016/j.funbio.2021.09.003. Epub 2021 Sep 20.
5
SKESA: strategic k-mer extension for scrupulous assemblies.SKESA:用于严谨组装的策略性 k--mer 扩展。
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BMC Bioinformatics. 2014 Jun 12;15:182. doi: 10.1186/1471-2105-15-182.