Kou Weixuan, Rey Cristian, Marshall Harry, Chiu Bernard
Department of Electrical Engineering, City University of Hong Kong, Hong Kong.
Schulich School of Medicine & Dentistry, Western University, London, ON N6A 5C1, Canada.
Bioengineering (Basel). 2024 Aug 6;11(8):796. doi: 10.3390/bioengineering11080796.
The accurate segmentation of prostate cancer (PCa) from multiparametric MRI is crucial in clinical practice for guiding biopsy and treatment planning. Existing automated methods often lack the necessary accuracy and robustness in localizing PCa, whereas interactive segmentation methods, although more accurate, require user intervention on each input image, thereby limiting the cost-effectiveness of the segmentation workflow. Our innovative framework addresses the limitations of current methods by combining a coarse segmentation network, a rejection network, and an interactive deep network known as Segment Anything Model (SAM). The coarse segmentation network automatically generates initial segmentation results, which are evaluated by the rejection network to estimate their quality. Low-quality results are flagged for user interaction, with the user providing a region of interest (ROI) enclosing the lesions, whereas for high-quality results, ROIs were cropped from the automatic segmentation. Both manually and automatically defined ROIs are fed into SAM to produce the final fine segmentation. This approach significantly reduces the annotation burden and achieves substantial improvements by flagging approximately 20% of the images with the lowest quality scores for manual annotation. With only half of the images manually annotated, the final segmentation accuracy is statistically indistinguishable from that achieved using full manual annotation. Although this paper focuses on prostate lesion segmentation from multimodality MRI, the framework can be adapted to other medical image segmentation applications to improve segmentation efficiency while maintaining high accuracy standards.
在临床实践中,从多参数磁共振成像(MRI)中准确分割前列腺癌(PCa)对于指导活检和治疗规划至关重要。现有的自动化方法在定位PCa时往往缺乏必要的准确性和鲁棒性,而交互式分割方法虽然更准确,但需要用户对每个输入图像进行干预,从而限制了分割工作流程的成本效益。我们的创新框架通过结合一个粗略分割网络、一个拒绝网络和一个名为“分割一切模型”(SAM)的交互式深度网络,解决了当前方法的局限性。粗略分割网络自动生成初始分割结果,由拒绝网络对其进行评估以估计其质量。低质量结果会被标记以供用户交互,用户提供包含病变的感兴趣区域(ROI),而对于高质量结果,则从自动分割中裁剪出ROI。手动和自动定义的ROI都被输入到SAM中以产生最终的精细分割。这种方法显著减轻了标注负担,并通过标记大约20%质量得分最低的图像进行手动标注,取得了显著的改进。仅对一半的图像进行手动标注,最终分割准确性在统计学上与使用全手动标注所达到的准确性没有区别。尽管本文重点关注从多模态MRI中分割前列腺病变,但该框架可适用于其他医学图像分割应用,以提高分割效率同时保持高精度标准。