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黑腹果蝇tRNAVal3b基因及其同种异体基因。

Drosophila melanogaster tRNAVal3b genes and their allogenes.

作者信息

Leung J, Addison W R, Delaney A D, MacKay R M, Miller R C, Spiegelman G B, Grigliatti T A, Tener G M

出版信息

Gene. 1985;34(2-3):207-17. doi: 10.1016/0378-1119(85)90129-5.

DOI:10.1016/0378-1119(85)90129-5
PMID:3924738
Abstract

Drosophila tRNAVal3b genes have been analyzed with respect to their nucleotide sequence and in vitro transcription efficiency. Plasmid pDt78R contains a single tRNA gene derived from the major tRNAVal3b gene cluster at chromosome band 84D. Its sequence corresponds to that of the tRNAVal3b. Two other plasmids, pDt41R and pDt48, each contain a tRNAVal3b-like gene from the minor tRNAVal3b gene cluster at chromosome bands 90BC. They contain the expected CAC anticodon, but their sequence differs from the tRNA at four positions. In homologous cell-free extracts, the tRNAVal3b variant genes in pDt41R and pDt48 are transcribed an order of magnitude more efficiently than the tRNAVal3b gene in pDt78R. However, the variant genes do not appear to contribute significantly to the in vivo tRNA pool [Larsen et al.: Mol. Gen. Genet. 185 (1982) 390-396]. We propose the term allogenes to describe families of related DNA sequences that may code for variant forms of a standard tRNA isoaccepting species.

摘要

对果蝇tRNAVal3b基因的核苷酸序列和体外转录效率进行了分析。质粒pDt78R含有一个来自染色体带84D处主要tRNAVal3b基因簇的单个tRNA基因。其序列与tRNAVal3b的序列相对应。另外两个质粒pDt41R和pDt48,每个都含有一个来自染色体带90BC处次要tRNAVal3b基因簇的类似tRNAVal3b的基因。它们含有预期的CAC反密码子,但它们的序列在四个位置上与tRNA不同。在同源无细胞提取物中,pDt41R和pDt48中的tRNAVal3b变体基因的转录效率比pDt78R中的tRNAVal3b基因高一个数量级。然而,这些变体基因似乎对体内tRNA库没有显著贡献[拉森等人:《分子遗传学与普通遗传学》185(1982)390 - 396]。我们提出“同种基因”这一术语来描述可能编码标准tRNA同功受体种类变体形式的相关DNA序列家族。

相似文献

1
Drosophila melanogaster tRNAVal3b genes and their allogenes.黑腹果蝇tRNAVal3b基因及其同种异体基因。
Gene. 1985;34(2-3):207-17. doi: 10.1016/0378-1119(85)90129-5.
2
Heteroduplex analysis of tRNAVal3b genes from the 90BC and 84D sites of Drosophila melanogaster.黑腹果蝇90BC和84D位点tRNAVal3b基因的异源双链分析。
Gene. 1981 Dec;15(4):361-4. doi: 10.1016/0378-1119(81)90179-7.
3
The nucleotide sequence of tRNAVal3a and tRNAVal3b from Drosophila melanogaster.黑腹果蝇中tRNAVal3a和tRNAVal3b的核苷酸序列。
Can J Biochem Cell Biol. 1985 Mar;63(3):176-82. doi: 10.1139/o85-025.
4
A Drosophila melanogaster transfer RNA gene cluster at the cytogenetic locus 90BC.位于细胞遗传学位点90BC的黑腹果蝇转移RNA基因簇。
J Mol Biol. 1984 Nov 15;179(4):587-605. doi: 10.1016/0022-2836(84)90157-8.
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RNA-DNA hybridization analyses of tRNA-Val-3b in Drosophila melanogaster.黑腹果蝇中tRNA-Val-3b的RNA-DNA杂交分析。
Mol Gen Genet. 1982;185(3):390-6. doi: 10.1007/BF00334129.
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Transcription of cloned transfer RNA genes from Drosophila melanogaster in a homologous cell-free extract.在同源无细胞提取物中对黑腹果蝇克隆的转运RNA基因进行转录。
Nucleic Acids Res. 1982 Oct 25;10(20):6541-50. doi: 10.1093/nar/10.20.6541.
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The initiator tRNA genes of Drosophila melanogaster: evidence for a tRNA pseudogene.黑腹果蝇的起始tRNA基因:tRNA假基因的证据。
Nucleic Acids Res. 1981 Nov 25;9(22):5867-82. doi: 10.1093/nar/9.22.5867.
8
The gross anatomy of a tRNA gene cluster at region 42A of the D. melanogaster chromosome.黑腹果蝇染色体42A区域tRNA基因簇的大体解剖结构。
Cell. 1980 Nov;22(1 Pt 1):137-48. doi: 10.1016/0092-8674(80)90162-2.
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Analysis of a drosophila tRNA gene cluster: two tRNALeu genes contain intervening sequences.果蝇tRNA基因簇的分析:两个亮氨酰tRNA基因含有间隔序列。
Cell. 1981 Jan;23(1):251-9. doi: 10.1016/0092-8674(81)90289-0.
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Intimate association of 5S RNA and tRNA genes in Drosophila melanogaster.黑腹果蝇中5S核糖体RNA基因与转运RNA基因的紧密关联。
Mol Gen Genet. 1982;188(2):299-304. doi: 10.1007/BF00332691.

引用本文的文献

1
Heterologous 5' flanking regions do not support in vitro template activity of a Drosophila melanogaster tRNA(Val3b) gene.异源5'侧翼区域不支持黑腹果蝇tRNA(Val3b)基因的体外模板活性。
Nucleic Acids Res. 1988 May 11;16(9):4137-53. doi: 10.1093/nar/16.9.4137.
2
Sequences between the internal control regions of tRNAArg of Drosophila melanogaster influence stimulation of transcription of the 5' flanking DNA.黑腹果蝇tRNAArg内部控制区域之间的序列影响5'侧翼DNA转录的刺激。
Nucleic Acids Res. 1988 Mar 25;16(6):2585-99. doi: 10.1093/nar/16.6.2585.
3
Genes, variant genes, and pseudogenes of the human tRNA(Val) gene family are differentially expressed in HeLa cells and in human placenta.
Nucleic Acids Res. 1990 Sep 11;18(17):5001-8. doi: 10.1093/nar/18.17.5001.