Yunnan Institute of Biological Diversity, Southwest Forestry University, Kunming, Yunnan Province, P.R. China.
Department of Forest Conservation, College of Biodiversity Conservation, Southwest Forestry University, Kunming, Yunnan Province, P.R. China.
PLoS One. 2024 Sep 18;19(9):e0310559. doi: 10.1371/journal.pone.0310559. eCollection 2024.
To understand the mitochondrial genome structure of two endangered and long-armed scarab beetles, Propomacrus davidi and Propomacrus bimucronatus, their complete mitogenomes were sequenced for the first time in this study. The complete mitogenomes of P. davidi and P. bimucronatus were 18, 042 bp and 18, 104 bp in length, respectively. The gene orders of their mitogenomes were highly consistent with other Coleopteran species, and the typical ATN was used as the start codon in most protein coding genes. The incomplete stop codon T was used in cox1, cox2, and nad5, and TAN was used as a complete stop codon in most protein coding genes. All predicted tRNAs could form a typical cloverleaf secondary structure, except that trnS1 lacked the dihydrouridine arm. Based on the maximum likelihood and the Bayesian inference methods, phylogenetic trees of 50 species were reconstructed. The results showed that P. davidi, P. bimucronatus, Cheirotonus jansoni and Cheirotonus gestroi clustered in the same branch, and were the most closely related. The results supported that subfamily Euchirinae is a monophyletic group of Scarabaeidae, which was consistent with the morphological classification. These molecular data enriched the complete mitogenome database of Euchirinae, and improved our understanding of the phylogenetic relationship and evolutionary characteristics of these two endangered species.
为了了解两种濒危长鼻角蝉(Propomacrus davidi 和 Propomacrus bimucronatus)的线粒体基因组结构,本研究首次对它们的完整线粒体基因组进行了测序。P. davidi 和 P. bimucronatus 的完整线粒体基因组分别长 18042bp 和 18104bp。它们的基因排列与其他鞘翅目物种高度一致,大多数蛋白质编码基因以典型的 ATN 作为起始密码子。cox1、cox2 和 nad5 中使用了不完整的终止密码子 T,而大多数蛋白质编码基因则使用 TAN 作为完整的终止密码子。所有预测的 tRNA 都能形成典型的三叶草二级结构,除了 trnS1 缺少二氢尿嘧啶臂。基于最大似然法和贝叶斯推断法,对 50 种物种进行了系统发育树重建。结果表明,P. davidi、P. bimucronatus、Cheirotonus jansoni 和 Cheirotonus gestroi 聚在同一分支,亲缘关系最近。结果支持了 Euchirinae 亚科是 Scarabaeidae 的单系群,这与形态分类一致。这些分子数据丰富了 Euchirinae 的完整线粒体基因组数据库,提高了我们对这两种濒危物种的系统发育关系和进化特征的认识。