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血管生成素-1基因内的一个拷贝数变异与雷州黑山羊的肉质相关。

One Copy Number Variation within the Angiopoietin-1 Gene Is Associated with Leizhou Black Goat Meat Quality.

作者信息

Wu Qun, Han Xiaotao, Zhang Yuelang, Liu Hu, Zhou Hanlin, Wang Ke, Han Jiancheng

机构信息

Zhanjiang Experimental Station, Chinese Academy of Tropical Agricultural Sciences, No. 5, Shetan Road, Xiashan Area, Zhanjiang 524013, China.

Hainan Institute, Zhejiang University, Sanya 572024, China.

出版信息

Animals (Basel). 2024 Sep 14;14(18):2682. doi: 10.3390/ani14182682.

Abstract

The gene plays a crucial role in the regulation of angiogenesis and muscle growth, with previous studies identifying copy number variations (CNVs) within this gene among Leizhou black goats. In this study, we investigated three CNVs in 417 individuals of LZBG using quantitative PCR (qPCR), examining the impact of different CNV types on the gene expression and their associations with growth and meat quality traits. Notably, the CNV-1 (ARS1_chr14:24950001-24953600) overlaps with protein-coding regions and conserved domains; its gain-of-copies genotype (copies ≥ 3) was significantly correlated with mRNA expression in muscle tissue ( < 0.01). Furthermore, the gain-of-copies genotype of CNV-1 demonstrated significant correlations with various phenotypic traits, including carcass weight, body weight, shear stress, chest circumference, and cross-sectional area of longissimus dorsi muscle. These findings indicate that the CNV-1 gain-of-copies genotype in the gene may serve as a valuable marker for selecting Leizhou black goats exhibiting enhanced growth and muscular development characteristics, thereby holding potential applications in targeted breeding programs aimed at improving meat quality.

摘要

该基因在血管生成和肌肉生长的调节中起着关键作用,先前的研究已在雷州黑山羊中鉴定出该基因内的拷贝数变异(CNV)。在本研究中,我们使用定量PCR(qPCR)对417只雷州黑山羊个体中的三个CNV进行了研究,考察了不同CNV类型对基因表达的影响及其与生长和肉质性状的关联。值得注意的是,CNV-1(ARS1_chr14:24950001-24953600)与蛋白质编码区和保守结构域重叠;其拷贝数增加基因型(拷贝数≥3)与肌肉组织中的mRNA表达显著相关(P<0.01)。此外,CNV-1的拷贝数增加基因型与各种表型性状显著相关,包括胴体重、体重、剪切力、胸围和背最长肌横截面积。这些发现表明,该基因中的CNV-1拷贝数增加基因型可能作为一个有价值的标记,用于选择具有增强生长和肌肉发育特征的雷州黑山羊,从而在旨在改善肉质的定向育种计划中具有潜在应用价值。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/731b/11428527/c60111ce3782/animals-14-02682-g001.jpg

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