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基于表达序列标签简单序列重复标记应用的哈萨克斯坦[具体物种1]和[具体物种2]种群的遗传多样性

Genetic Diversity of and Populations from Kazakhstan Based on Application of Expressed Sequence Tag Simple Sequence Repeat Markers.

作者信息

Yermagambetova Moldir, Almerekova Shyryn, Ivashchenko Anna, Turuspekov Yerlan, Abugalieva Saule

机构信息

Institute of Plant Biology and Biotechnology, Almaty 050040, Kazakhstan.

Faculty of Biology and Biotechnology, Al-Farabi Kazakh National University, Almaty 050038, Kazakhstan.

出版信息

Plants (Basel). 2024 Sep 23;13(18):2667. doi: 10.3390/plants13182667.

Abstract

The genus L., renowned for its ornamental and ecological significance, encompasses a diversity of species primarily concentrated in the Tian Shan and Pamir-Alay Mountain ranges. With its varied landscapes, Kazakhstan harbors 42 species, including the endangered Regel and Regel, which are critical for biodiversity yet face significant threats from human activities. This study aimed to assess these two species' genetic diversity and population structure using 15 expressed sequence tag simple sequence repeat (EST-SSR) markers. Leaf samples from 423 individuals across 23 natural populations, including 11 populations of and 12 populations of , were collected and genetically characterized using EST-SSR markers. The results revealed relatively high levels of genetic variation in compared to . The average number of alleles per locus was 1.9 for and 2.8 for . AMOVA indicated substantial genetic variation within populations (75% for and 77% for ). The Bayesian analysis of the population structure of the two species indicated an optimal value of K = 3 for both species, splitting all sampled populations into three distinct genetic clusters. Populations with the highest level of genetic diversity were identified in both species. The results underscore the importance of conserving the genetic diversity of populations, which can help develop strategies for their preservation in stressed ecological conditions.

摘要

L.属以其观赏和生态意义而闻名,包含多种物种,主要集中在天山和帕米尔 - 阿赖山脉。哈萨克斯坦拥有多样的地貌,有42种该属植物,包括濒危的Regel和Regel,它们对生物多样性至关重要,但面临着来自人类活动的重大威胁。本研究旨在使用15个表达序列标签简单序列重复(EST - SSR)标记评估这两个物种的遗传多样性和种群结构。采集了来自23个自然种群的423个个体的叶片样本,其中包括11个Regel种群和12个Regel种群,并使用EST - SSR标记对其进行遗传特征分析。结果显示,与Regel相比,某物种(此处原文未明确指出具体物种名)具有相对较高水平的遗传变异。每个位点的平均等位基因数,某物种(此处原文未明确指出具体物种名)为1.9,Regel为2.8。分子方差分析(AMOVA)表明种群内存在大量遗传变异(某物种(此处原文未明确指出具体物种名)为75%,Regel为77%)。对这两个物种的种群结构进行的贝叶斯分析表明,两个物种的最佳K值均为3,将所有采样种群分为三个不同的遗传簇。在两个物种中都确定了遗传多样性水平最高的种群。结果强调了保护某物种(此处原文未明确指出具体物种名)种群遗传多样性的重要性,这有助于制定在压力生态条件下对其进行保护的策略。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1ca3/11435150/4e27ae48e8bf/plants-13-02667-g001.jpg

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