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临床研究中的神经鞘脂分析。

Sphingolipid Analysis in Clinical Research.

机构信息

Singapore Lipidomics Incubator (SLING), Life Sciences Institute, National University of Singapore, Singapore, Singapore.

Precision Medicine Translational Research Programme and Department of Biochemistry, YLL School of Medicine, National University of Singapore, Singapore, Singapore.

出版信息

Methods Mol Biol. 2025;2855:225-268. doi: 10.1007/978-1-0716-4116-3_15.

DOI:10.1007/978-1-0716-4116-3_15
PMID:39354312
Abstract

Sphingolipids are the most diverse class of lipids due to the numerous variations in their structural components. This diversity is also reflected in their extremely different functions. Sphingolipids are not only constituents of cell membranes but have emerged as key signaling molecules involved in a variety of cellular functions, such as cell growth and differentiation, proliferation and apoptotic cell death. Lipidomic analyses in clinical research have identified pathways and products of sphingolipid metabolism that are altered in several human pathologies. In this article, we describe how to properly design a lipidomic experiment in clinical research, how to handle plasma and serum samples for this purpose, and how to measure sphingolipids using liquid chromatography-mass spectrometry.

摘要

鞘脂是脂质中种类最多的一类,这是由于其结构成分的多样性。这种多样性也反映在它们极其不同的功能上。鞘脂不仅是细胞膜的组成部分,而且已经成为涉及多种细胞功能的关键信号分子,如细胞生长和分化、增殖和凋亡细胞死亡。临床研究中的脂质组学分析已经确定了几种人类疾病中代谢的鞘脂途径和产物发生了改变。在本文中,我们描述了如何在临床研究中正确设计脂质组学实验,如何为此目的处理血浆和血清样本,以及如何使用液相色谱-质谱法测量鞘脂。

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1
Sphingolipid Analysis in Clinical Research.临床研究中的神经鞘脂分析。
Methods Mol Biol. 2025;2855:225-268. doi: 10.1007/978-1-0716-4116-3_15.
2
Sphingolipid Analysis in Clinical Research.临床研究中的鞘脂分析
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Solving the enigma: Mass spectrometry and small molecule probes to study sphingolipid function.破解谜团:质谱分析和小分子探针研究鞘脂类的功能。
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Sphingolipidomics: high-throughput, structure-specific, and quantitative analysis of sphingolipids by liquid chromatography tandem mass spectrometry.鞘脂组学:通过液相色谱串联质谱法对鞘脂进行高通量、结构特异性和定量分析。
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Anal Bioanal Chem. 2022 Mar;414(6):2041-2054. doi: 10.1007/s00216-021-03853-z. Epub 2022 Jan 23.
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Development of an advanced liquid chromatography-tandem mass spectrometry measurement system for simultaneous sphingolipid analysis.开发一种用于同时分析鞘脂的先进液相色谱-串联质谱测量系统。
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Analysis of Sphingosine and Sphinganine from the Aqueous Humor for Signaling Studies Using Ultrahigh-Performance Liquid Chromatography-Mass Spectrometry.采用超高效液相色谱-质谱联用技术分析房水中小神经酰胺和神经鞘氨醇用于信号研究。
Methods Mol Biol. 2024;2816:35-40. doi: 10.1007/978-1-0716-3902-3_4.

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本文引用的文献

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The sphingolipid anteome: implications for evolution of the sphingolipid metabolic pathway.鞘脂前体组:对鞘脂代谢途径进化的影响
FEBS Lett. 2022 Sep;596(18):2345-2363. doi: 10.1002/1873-3468.14457. Epub 2022 Aug 4.
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Challenges and opportunities for prevention and removal of unwanted variation in lipidomic studies.脂质组学研究中消除和预防非预期变异的挑战与机遇。
Prog Lipid Res. 2022 Jul;87:101177. doi: 10.1016/j.plipres.2022.101177. Epub 2022 Jun 30.
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A reference map of sphingolipids in murine tissues.鼠组织中神经鞘脂类的参考图谱。
Cell Rep. 2021 Jun 15;35(11):109250. doi: 10.1016/j.celrep.2021.109250.
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Sphingolipid lysosomal storage diseases: from bench to bedside.鞘脂类溶酶体贮积症:从基础到临床。
Lipids Health Dis. 2021 May 3;20(1):44. doi: 10.1186/s12944-021-01466-0.
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LICAR: An Application for Isotopic Correction of Targeted Lipidomic Data Acquired with Class-Based Chromatographic Separations Using Multiple Reaction Monitoring.LICAR:一种用于对通过基于类别色谱分离并使用多反应监测获取的靶向脂质组学数据进行同位素校正的应用程序。
Anal Chem. 2021 Feb 16;93(6):3163-3171. doi: 10.1021/acs.analchem.0c04565. Epub 2021 Feb 3.
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MRMkit: Automated Data Processing for Large-Scale Targeted Metabolomics Analysis.MRMkit:用于大规模靶向代谢组学分析的自动化数据处理。
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A perilous path: the inborn errors of sphingolipid metabolism.一条危险的道路:鞘脂类代谢的先天性错误。
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Guidelines and considerations for the use of system suitability and quality control samples in mass spectrometry assays applied in untargeted clinical metabolomic studies.非靶向临床代谢组学研究中质谱分析中系统适用性和质量控制样品使用的指南与注意事项。
Metabolomics. 2018;14(6):72. doi: 10.1007/s11306-018-1367-3. Epub 2018 May 18.
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Sphingolipids and Lipoproteins in Health and Metabolic Disorders.健康与代谢紊乱中的鞘脂和脂蛋白
Trends Endocrinol Metab. 2017 Jul;28(7):506-518. doi: 10.1016/j.tem.2017.03.005. Epub 2017 Apr 24.
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Lipidomics in biomedical research-practical considerations.生物医学研究中的脂质组学——实际考虑因素。
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