Department of Systems Biology, Blavatnik Institute at Harvard Medical School, Boston, MA 02115, USA.
Department of Systems Biology, Blavatnik Institute at Harvard Medical School, Boston, MA 02115, USA; Niels Bohr Institute, University of Copenhagen, Copenhagen 2100, Denmark.
Cell Syst. 2024 Oct 16;15(10):956-968.e3. doi: 10.1016/j.cels.2024.09.001. Epub 2024 Oct 4.
The tumor suppressor p53 responds to cellular stress and activates transcription programs critical for regulating cell fate. DNA damage triggers oscillations in p53 levels with a robust period. Guided by the theory of synchronization and entrainment, we developed a mathematical model and experimental system to test the ability of the p53 oscillator to entrain to external drug pulses of various periods and strengths. We found that the p53 oscillator can be locked and entrained to a wide range of entrainment modes. External periods far from p53's natural oscillations increased the heterogeneity between individual cells whereas stronger inputs reduced it. Single-cell measurements allowed deriving the phase response curves (PRCs) and multiple Arnold tongues of p53. In addition, multi-stability and non-linear behaviors were mathematically predicted and experimentally detected, including mode hopping, period doubling, and chaos. Our work revealed critical dynamical properties of the p53 oscillator and provided insights into understanding and controlling it. A record of this paper's transparent peer review process is included in the supplemental information.
肿瘤抑制因子 p53 响应细胞应激,并激活对调节细胞命运至关重要的转录程序。DNA 损伤引发 p53 水平的振荡,其周期具有很强的稳定性。受同步和驯化理论的指导,我们开发了一个数学模型和实验系统,以测试 p53 振荡器对各种周期和强度的外部药物脉冲进行锁定和驯化的能力。我们发现,p53 振荡器可以被锁定并驯化到广泛的驯化模式中。远离 p53 自然振荡的外部周期会增加单个细胞之间的异质性,而更强的输入则会降低异质性。单细胞测量允许得出 p53 的相位响应曲线 (PRC) 和多个 Arnold 舌头。此外,数学预测和实验检测到了多稳定性和非线性行为,包括模式跳跃、倍周期和混沌。我们的工作揭示了 p53 振荡器的关键动力学特性,并为理解和控制它提供了线索。本文的透明同行评审过程记录包含在补充信息中。