Sharma Abhishek, Sanvito Stefano
School of Physics, AMBER and CRANN Institute, Trinity College, Dublin 2, Ireland.
NPJ Comput Mater. 2024;10(1):237. doi: 10.1038/s41524-024-01427-y. Epub 2024 Oct 8.
Understanding structural flexibility of metal-organic frameworks (MOFs) via molecular dynamics simulations is crucial to design better MOFs. Density functional theory (DFT) and quantum-chemistry methods provide highly accurate molecular dynamics, but the computational overheads limit their use in long time-dependent simulations. In contrast, classical force fields struggle with the description of coordination bonds. Here we develop a DFT-accurate machine-learning spectral neighbor analysis potentials for two representative MOFs. Their structural and vibrational properties are then studied and tightly compared with available experimental data. Most importantly, we demonstrate an active-learning algorithm, based on mapping the relevant internal coordinates, which drastically reduces the number of training data to be computed at the DFT level. Thus, the workflow presented here appears as an efficient strategy for the study of flexible MOFs with DFT accuracy, but at a fraction of the DFT computational cost.
通过分子动力学模拟了解金属有机框架(MOF)的结构灵活性对于设计更好的MOF至关重要。密度泛函理论(DFT)和量子化学方法提供了高度精确的分子动力学,但计算开销限制了它们在长时间依赖模拟中的应用。相比之下,经典力场在配位键的描述方面存在困难。在这里,我们为两种代表性的MOF开发了一种DFT精确的机器学习光谱邻域分析势。然后研究了它们的结构和振动特性,并与现有的实验数据进行了紧密比较。最重要的是,我们展示了一种基于映射相关内部坐标的主动学习算法,该算法大大减少了在DFT水平上需要计算的训练数据数量。因此,这里提出的工作流程似乎是一种以DFT精度研究柔性MOF的有效策略,但计算成本仅为DFT的一小部分。