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一种普遍存在的移动遗传元件改变了人类肠道共生体的拮抗武器。

A ubiquitous mobile genetic element changes the antagonistic weaponry of a human gut symbiont.

机构信息

Duchossois Family Institute, University of Chicago, Chicago, IL, USA.

Department of Microbiology, University of Chicago, Chicago, IL, USA.

出版信息

Science. 2024 Oct 25;386(6720):414-420. doi: 10.1126/science.adj9504. Epub 2024 Oct 24.

DOI:10.1126/science.adj9504
PMID:39446952
Abstract

DNA transfer is ubiquitous in the human gut microbiota, especially among species of the order Bacteroidales. In silico analyses have revealed hundreds of mobile genetic elements shared between these species, yet little is known about the phenotypes they encode, their effects on fitness, or pleiotropic consequences for the recipient's genome. In this work, we show that acquisition of a ubiquitous integrative conjugative element (ICE) encoding a type VI secretion system (T6SS) shuts down the native T6SS of . Despite inactivating this T6SS, ICE acquisition increases the fitness of the transconjugant over its progenitor by arming it with the new T6SS. DNA transfer causes the strain to change allegiances so that it no longer targets ecosystem members with the same element yet is armed for communal defense.

摘要

DNA 转移在人类肠道微生物群中普遍存在,尤其是在拟杆菌目(Bacteroidales)的物种中。计算机分析揭示了这些物种之间存在数百种可移动遗传元件,但对于它们编码的表型、对适应性的影响,或对受体基因组的多效性后果知之甚少。在这项工作中,我们表明,一种普遍存在的整合性 conjugative 元件(ICE)的获得,该元件编码一种 VI 型分泌系统(T6SS),会关闭的天然 T6SS。尽管使这种 T6SS 失活,但 ICE 的获得通过赋予新的 T6SS,使 转导子的适应性比其亲本增加。DNA 转移导致菌株改变效忠关系,使其不再针对具有相同元件的生态系统成员,但为社区防御做好了武装。

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Cell Host Microbe. 2024 Oct 9;32(10):1853-1867.e5. doi: 10.1016/j.chom.2024.08.016. Epub 2024 Sep 17.
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Assembly of a unique membrane complex in type VI secretion systems of Bacteroidota.组装细菌门 VI 型分泌系统中的独特膜复合物。
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Structural disruption of Ntox15 nuclease effector domains by immunity proteins protects against type VI secretion system intoxication in Bacteroidales.
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Interactions and evolutionary relationships among bacterial mobile genetic elements.细菌移动遗传元件之间的相互作用及进化关系。
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